41 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ISL2	ISL LIM homeobox 2b. (364 aa)
	isl1	ISL LIM homeobox 1. (349 aa)
	LOC108241502	Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. (102 aa)
	NELL1	Neural EGFL like 1. (659 aa)
	cxcl12	Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1). (98 aa)
	LOC108245537	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (550 aa)
	slit1	Slit homolog 1a (Drosophila). (1533 aa)
	myo9b	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1844 aa)
	LOC108238199	Vasodilator stimulated phosphoprotein b. (411 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	lhx9	LIM homeobox 9. (400 aa)
	LOC108238345	Profilin; Belongs to the profilin family. (139 aa)
	LOC108247446	Slit homolog 1b (Drosophila). (1427 aa)
	LOC108234788	Enah/Vasp-like. (372 aa)
	ENSKMAP00000009532	LIM zinc-binding domain-containing protein. (84 aa)
	LOC108249835	WH1 domain-containing protein. (408 aa)
	robo2	Roundabout, axon guidance receptor, homolog 2 (Drosophila). (1604 aa)
	LOC108234356	Profilin; Belongs to the profilin family. (209 aa)
	robo1	Roundabout, axon guidance receptor, homolog 1 (Drosophila). (1516 aa)
	nell2	Neural EGFL like 2a. (813 aa)
	lhx2	LIM homeobox 2b. (397 aa)
	LOC108233901	Uncharacterized protein. (1572 aa)
	LOC108238434	Glypican 1a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (542 aa)
	LOC108233822	Uncharacterized protein. (1397 aa)
	enah	ENAH actin regulator. (855 aa)
	zswim8	Zinc finger, SWIM-type containing 8. (1957 aa)
	Robo3	Roundabout, axon guidance receptor, homolog 3 (Drosophila). (573 aa)
	ubb	Uncharacterized protein. (270 aa)
	cxcr4	C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family. (379 aa)
	LOC108235256	Peptidase S72 domain-containing protein. (910 aa)
	LOC108229936	ISL LIM homeobox 2a. (360 aa)
	abl1	Tyrosine-protein kinase. (1121 aa)
	nptn	Neuroplastin b. (397 aa)
	dag1	Dystroglycan 1. (815 aa)
	LOC108236657	Slit homolog 3 (Drosophila). (1538 aa)
	nyx	Nyctalopin. (445 aa)
	ENSKMAP00000016535	LRRNT domain-containing protein. (74 aa)
	slit2	Slit homolog 2 (Drosophila). (1582 aa)
	robo4	Roundabout, axon guidance receptor, homolog 4 (Drosophila). (1067 aa)
	LOC108231851	Enah/Vasp-like b. (413 aa)
	LOC108230156	Uncharacterized protein. (274 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000016535	LOC108233822	ENSKMAP00000016535	ENSKMAP00000013963	LRRNT domain-containing protein.	Uncharacterized protein.	0.670
ENSKMAP00000016535	LOC108233901	ENSKMAP00000016535	ENSKMAP00000013846	LRRNT domain-containing protein.	Uncharacterized protein.	0.686
ENSKMAP00000016535	LOC108235256	ENSKMAP00000016535	ENSKMAP00000023006	LRRNT domain-containing protein.	Peptidase S72 domain-containing protein.	0.448
ENSKMAP00000016535	Robo3	ENSKMAP00000016535	ENSKMAP00000017322	LRRNT domain-containing protein.	Roundabout, axon guidance receptor, homolog 3 (Drosophila).	0.667
ENSKMAP00000016535	abl1	ENSKMAP00000016535	ENSKMAP00000023528	LRRNT domain-containing protein.	Tyrosine-protein kinase.	0.494
ENSKMAP00000016535	dag1	ENSKMAP00000016535	ENSKMAP00000014311	LRRNT domain-containing protein.	Dystroglycan 1.	0.448
ENSKMAP00000016535	robo1	ENSKMAP00000016535	ENSKMAP00000012189	LRRNT domain-containing protein.	Roundabout, axon guidance receptor, homolog 1 (Drosophila).	0.686
ENSKMAP00000016535	robo2	ENSKMAP00000016535	ENSKMAP00000011779	LRRNT domain-containing protein.	Roundabout, axon guidance receptor, homolog 2 (Drosophila).	0.670
ENSKMAP00000016535	robo4	ENSKMAP00000016535	ENSKMAP00000000606	LRRNT domain-containing protein.	Roundabout, axon guidance receptor, homolog 4 (Drosophila).	0.680
LOC108231851	LOC108234356	ENSKMAP00000000726	ENSKMAP00000011872	Enah/Vasp-like b.	Profilin; Belongs to the profilin family.	0.524
LOC108231851	LOC108238345	ENSKMAP00000000726	ENSKMAP00000006061	Enah/Vasp-like b.	Profilin; Belongs to the profilin family.	0.524
LOC108231851	abl1	ENSKMAP00000000726	ENSKMAP00000023528	Enah/Vasp-like b.	Tyrosine-protein kinase.	0.479
LOC108233822	ENSKMAP00000016535	ENSKMAP00000013963	ENSKMAP00000016535	Uncharacterized protein.	LRRNT domain-containing protein.	0.670
LOC108233822	LOC108236657	ENSKMAP00000013963	ENSKMAP00000014710	Uncharacterized protein.	Slit homolog 3 (Drosophila).	0.689
LOC108233822	LOC108247446	ENSKMAP00000013963	ENSKMAP00000008211	Uncharacterized protein.	Slit homolog 1b (Drosophila).	0.670
LOC108233822	abl1	ENSKMAP00000013963	ENSKMAP00000023528	Uncharacterized protein.	Tyrosine-protein kinase.	0.501
LOC108233822	myo9b	ENSKMAP00000013963	ENSKMAP00000029998	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.424
LOC108233822	nyx	ENSKMAP00000013963	ENSKMAP00000014718	Uncharacterized protein.	Nyctalopin.	0.667
LOC108233822	slit1	ENSKMAP00000013963	ENSKMAP00000028573	Uncharacterized protein.	Slit homolog 1a (Drosophila).	0.670
LOC108233822	slit2	ENSKMAP00000013963	ENSKMAP00000000072	Uncharacterized protein.	Slit homolog 2 (Drosophila).	0.670