STRINGSTRING
ncor1 ncor1 med21 med21 fabp1 fabp1 grhl2 grhl2 fhl2 fhl2 LOC108231329 LOC108231329 LOC108234793 LOC108234793 ppargc1b ppargc1b LOC108238308 LOC108238308 nfyc nfyc ppargc1a ppargc1a med22 med22 LOC108228834 LOC108228834 HDAC3 HDAC3 med11 med11 grhl1 grhl1 ncoa2 ncoa2 LOC108241436 LOC108241436 ankrd1 ankrd1 LOC108251067 LOC108251067 med9 med9 med29 med29 nfyb nfyb ENSKMAP00000014556 ENSKMAP00000014556 LOC108234069 LOC108234069 med19 med19 map7 map7 thrap3 thrap3 med18 med18 ENSKMAP00000017881 ENSKMAP00000017881 mtf1 mtf1 LOC108247643 LOC108247643 nrf1 nrf1 MED26 MED26 rxra rxra PPARA PPARA ncoa1 ncoa1 med1 med1 nfya nfya helz2 helz2 LOC108239707 LOC108239707 LOC108237043 LOC108237043 ncoa6 ncoa6 G0s2 G0s2 map7d1 map7d1 fhl3 fhl3 tgs1 tgs1 LOC108241482 LOC108241482 ncor2 ncor2 LOC108248999 LOC108248999 LOC108249002 LOC108249002 fam120b fam120b carm1 carm1 LOC108243856 LOC108243856 haus5 haus5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ncor1Nuclear receptor corepressor 1. (2321 aa)
med21Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (150 aa)
fabp1Fatty acid binding protein 1b, tandem duplicate 1. (127 aa)
grhl2Uncharacterized protein. (625 aa)
fhl2Four and a half LIM domains 2b. (281 aa)
LOC108231329MAP7 domain containing 3. (836 aa)
LOC108234793SIN3 transcription regulator family member Ab. (1289 aa)
ppargc1bPeroxisome proliferator-activated receptor gamma, coactivator 1 beta. (904 aa)
LOC108238308Transducin (beta)-like 1 X-linked receptor 1b. (512 aa)
nfycNuclear transcription factor Y, gamma. (356 aa)
ppargc1aPeroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (940 aa)
med22Mediator complex subunit 22. (201 aa)
LOC108228834Thyroid hormone receptor associated protein 3a. (884 aa)
HDAC3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (428 aa)
med11Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (120 aa)
grhl1Grainyhead-like transcription factor 1. (615 aa)
ncoa2Nuclear receptor coactivator. (1424 aa)
LOC108241436Grainyhead-like transcription factor 2b. (602 aa)
ankrd1Ankyrin repeat domain 1a (cardiac muscle). (314 aa)
LOC108251067SIN3 transcription regulator family member Aa. (1262 aa)
med9Mediator of RNA polymerase II transcription subunit 9; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (100 aa)
med29Mediator complex subunit 29. (177 aa)
nfybNuclear transcription factor Y, beta a. (204 aa)
ENSKMAP00000014556Tumor necrosis factor receptor superfamily, member 21. (607 aa)
LOC108234069Four and a half LIM domains 5. (281 aa)
med19Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (242 aa)
map7Microtubule associated protein 7. (828 aa)
thrap3Thyroid hormone receptor associated protein 3b. (897 aa)
med18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (209 aa)
ENSKMAP00000017881Uncharacterized protein. (179 aa)
mtf1Metal-regulatory transcription factor 1. (804 aa)
LOC108247643CREB binding protein b. (2428 aa)
nrf1Nuclear respiratory factor 1. (520 aa)
MED26Mediator complex subunit 26. (605 aa)
rxraRetinoid X receptor, alpha a. (496 aa)
PPARAPeroxisome proliferator-activated receptor alpha b. (468 aa)
ncoa1Nuclear receptor coactivator 1. (1473 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1802 aa)
nfyaNuclear transcription factor Y, alpha, like. (348 aa)
helz2Uncharacterized protein. (2894 aa)
LOC108239707Transducin beta like 1 X-linked. (513 aa)
LOC108237043Uncharacterized protein. (791 aa)
ncoa6Nuclear receptor coactivator 6. (2297 aa)
G0s2Uncharacterized protein. (52 aa)
map7d1MAP7 domain containing 1a. (774 aa)
fhl3Four and a half LIM domains 3a. (290 aa)
tgs1Uncharacterized protein. (801 aa)
LOC108241482CREB binding protein a. (2490 aa)
ncor2Nuclear receptor corepressor 2. (1795 aa)
LOC108248999Uncharacterized protein. (279 aa)
LOC108249002Uncharacterized protein. (168 aa)
fam120bFamily with sequence similarity 120B. (731 aa)
carm1Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (581 aa)
LOC108243856Nuclear receptor coactivator. (1504 aa)
haus5SIN3 transcription regulator family member B. (1260 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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