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polr2b polr2b cul4b cul4b cops3 cops3 gtf2h4 gtf2h4 polr2i polr2i tcea1 tcea1 ddb1 ddb1 rps27a rps27a polr2l polr2l ENSKMAP00000004765 ENSKMAP00000004765 cops2 cops2 uba52 uba52 ccnh ccnh kxd1 kxd1 POLR2E POLR2E mnat1 mnat1 ZNF830 ZNF830 LOC108250440 LOC108250440 uvssa uvssa cops8 cops8 LOC108239717 LOC108239717 cops5 cops5 ppp1r42 ppp1r42 polr2h polr2h nrde2 nrde2 gtf2h5 gtf2h5 cops7a cops7a cops4 cops4 prpf19 prpf19 Polr2d Polr2d LOC108244692 LOC108244692 polr2g polr2g aqr aqr ubb ubb cdk7 cdk7 tcea3 tcea3 ppie ppie polr2f polr2f polr2j polr2j ercc8 ercc8 rbx1 rbx1 ep300 ep300 gps1 gps1 LOC108238001 LOC108238001 xab2 xab2 polr2c polr2c LOC108248915 LOC108248915 polr2a polr2a usp7 usp7 LOC108232081 LOC108232081 COPS6 COPS6 gtf2h3 gtf2h3 ercc6 ercc6 xpa xpa tceanc2 tceanc2 gtf2h1 gtf2h1 ENSKMAP00000028503 ENSKMAP00000028503 ercc2 ercc2 ercc3 ercc3 LOC108232507 LOC108232507 LOC108229807 LOC108229807
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
cul4bCullin 4B; Belongs to the cullin family. (869 aa)
cops3COP9 signalosome subunit 3. (423 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
tcea1Transcription elongation factor A (SII), 1. (310 aa)
ddb1Damage-specific DNA binding protein 1. (1075 aa)
rps27aRibosomal protein S27a. (156 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
ENSKMAP00000004765Uncharacterized protein. (307 aa)
cops2COP9 signalosome subunit 2. (443 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ccnhCyclin H; Belongs to the cyclin family. (333 aa)
kxd1KxDL motif containing 1. (185 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
ZNF830Zinc finger protein 830. (339 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
uvssaUV-stimulated scaffold protein A. (762 aa)
cops8COP9 signalosome subunit 8. (191 aa)
LOC108239717Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
cops5COP9 signalosome subunit 5. (334 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (283 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
nrde2NRDE-2, necessary for RNA interference, domain containing. (1200 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
Polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (177 aa)
LOC108244692Si:ch73-1a9.3. (80 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (189 aa)
aqrAquarius intron-binding spliceosomal factor. (1458 aa)
ubbUncharacterized protein. (270 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
tcea3Transcription elongation factor A (SII), 3. (340 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (149 aa)
ercc8Excision repair cross-complementation group 8. (401 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
ep300E1A binding protein p300 b. (2785 aa)
gps1G protein pathway suppressor 1. (487 aa)
LOC108238001High mobility group nucleosome binding domain 6. (94 aa)
xab2XPA binding protein 2. (849 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
LOC108248915DNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1777 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1102 aa)
LOC108232081Transcription elongation factor A (SII), 2. (305 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (299 aa)
ercc6Excision repair cross-complementation group 6. (1442 aa)
xpaXeroderma pigmentosum, complementation group A. (275 aa)
tceanc2Uncharacterized protein. (207 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (409 aa)
ENSKMAP00000028503PH_TFIIH domain-containing protein. (131 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
LOC108232507General transcription factor IIH subunit. (392 aa)
LOC108229807Cullin 4A; Belongs to the cullin family. (746 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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