STRINGSTRING
abraxas1 abraxas1 LOC108246065 LOC108246065 blm blm ENSKMAP00000022564 ENSKMAP00000022564 exd2 exd2 YWHAB YWHAB topbp1 topbp1 rad17 rad17 ENSKMAP00000028001 ENSKMAP00000028001 DNA2 DNA2 ENSKMAP00000027458 ENSKMAP00000027458 atrip atrip brca1 brca1 Rbbp8 Rbbp8 ENSKMAP00000023736 ENSKMAP00000023736 ENSKMAP00000023289 ENSKMAP00000023289 chek1 chek1 LOC108235081 LOC108235081 ENSKMAP00000000467 ENSKMAP00000000467 Atm Atm ywhaz ywhaz ENSKMAP00000000943 ENSKMAP00000000943 ENSKMAP00000001053 ENSKMAP00000001053 ENSKMAP00000001130 ENSKMAP00000001130 ankrd11 ankrd11 rfc5 rfc5 CDCA7L CDCA7L ENSKMAP00000003442 ENSKMAP00000003442 ENSKMAP00000003646 ENSKMAP00000003646 pias4 pias4 nbn nbn ENSKMAP00000004573 ENSKMAP00000004573 LOC108229423 LOC108229423 babam2 babam2 slf1 slf1 ube2n ube2n LOC108241661 LOC108241661 ENSKMAP00000006347 ENSKMAP00000006347 ube2v2 ube2v2 rpa1 rpa1 rfc3 rfc3 LOC108248076 LOC108248076 ENSKMAP00000008060 ENSKMAP00000008060 ENSKMAP00000008309 ENSKMAP00000008309 ENSKMAP00000008333 ENSKMAP00000008333 ENSKMAP00000008781 ENSKMAP00000008781 LOC108237209 LOC108237209 ENSKMAP00000009231 ENSKMAP00000009231 ENSKMAP00000009313 ENSKMAP00000009313 tp53bp1 tp53bp1 LOC108240030 LOC108240030 LOC108240031 LOC108240031 ENSKMAP00000009514 ENSKMAP00000009514 Rad9b Rad9b LOC108248126 LOC108248126 LOC108247233 LOC108247233 LOC108241206 LOC108241206 ENSKMAP00000011321 ENSKMAP00000011321 rfc2 rfc2 ccnb1 ccnb1 kat5 kat5 LOC108248151 LOC108248151 mre11 mre11 mdc1 mdc1 recql4 recql4 rad50 rad50 ENSKMAP00000012922 ENSKMAP00000012922 LOC108229777 LOC108229777 ENSKMAP00000013203 ENSKMAP00000013203 LOC108236023 LOC108236023 hus1 hus1 Brcc3 Brcc3 nsd2 nsd2 rfc4 rfc4 rad9a rad9a LOC108245856 LOC108245856 rhno1 rhno1 ENSKMAP00000017454 ENSKMAP00000017454 rpa2 rpa2 exo1 exo1 LOC108233911 LOC108233911 ENSKMAP00000018069 ENSKMAP00000018069 uimc1 uimc1 ENSKMAP00000000423 ENSKMAP00000000423 TP53 TP53 rad1 rad1 babam1 babam1 ENSKMAP00000019521 ENSKMAP00000019521 ENSKMAP00000019606 ENSKMAP00000019606 rpa3 rpa3 ENSKMAP00000020023 ENSKMAP00000020023 cdk1 cdk1 ENSKMAP00000020216 ENSKMAP00000020216 LOC108246551 LOC108246551 ENSKMAP00000020407 ENSKMAP00000020407 LOC108243642 LOC108243642 ENSKMAP00000020635 ENSKMAP00000020635 wee1 wee1 top3a top3a cdca7 cdca7 ENSKMAP00000021337 ENSKMAP00000021337 ENSKMAP00000021513 ENSKMAP00000021513 ENSKMAP00000021569 ENSKMAP00000021569 ENSKMAP00000029997 ENSKMAP00000029997 tdrd3 tdrd3 LOC108237560 LOC108237560 ENSKMAP00000028753 ENSKMAP00000028753 rmi1 rmi1 ankrd12 ankrd12 rmi2 rmi2 rnf8 rnf8 ENSKMAP00000024731 ENSKMAP00000024731 ENSKMAP00000024676 ENSKMAP00000024676 ENSKMAP00000000178 ENSKMAP00000000178 RPA1 RPA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
abraxas1Abraxas 1, BRCA1 A complex subunit. (349 aa)
LOC108246065Cell division cycle 25B. (528 aa)
blmBLM RecQ like helicase. (1384 aa)
ENSKMAP00000022564Histone H2B; Belongs to the histone H2B family. (168 aa)
exd2Exonuclease 3'-5' domain containing 2. (639 aa)
YWHABTyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b; Belongs to the 14-3-3 family. (244 aa)
topbp1DNA topoisomerase II binding protein 1. (1510 aa)
rad17RAD17 checkpoint clamp loader component. (528 aa)
ENSKMAP00000028001Reverse transcriptase domain-containing protein. (874 aa)
DNA2DNA replication helicase/nuclease 2. (1388 aa)
ENSKMAP00000027458Reverse transcriptase domain-containing protein. (1256 aa)
atripUncharacterized protein. (776 aa)
brca1Uncharacterized protein. (1354 aa)
Rbbp8SAE2 domain-containing protein. (82 aa)
ENSKMAP00000023736Reverse transcriptase domain-containing protein. (885 aa)
ENSKMAP00000023289Uncharacterized protein. (164 aa)
chek1Checkpoint kinase 1; Belongs to the protein kinase superfamily. (455 aa)
LOC108235081UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
ENSKMAP00000000467TAN domain-containing protein. (123 aa)
AtmUncharacterized protein. (130 aa)
ywhaz14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (248 aa)
ENSKMAP00000000943Uncharacterized protein. (144 aa)
ENSKMAP00000001053Uncharacterized protein. (109 aa)
ENSKMAP00000001130Reverse transcriptase domain-containing protein. (1110 aa)
ankrd11Ankyrin repeat domain 11. (2822 aa)
rfc5Replication factor C (activator 1) 5. (339 aa)
CDCA7Lzf-4CXXC_R1 domain-containing protein. (406 aa)
ENSKMAP00000003442Reverse transcriptase domain-containing protein. (1237 aa)
ENSKMAP00000003646Uncharacterized protein; Belongs to the histone H2B family. (148 aa)
pias4Protein inhibitor of activated STAT, 4a. (507 aa)
nbnNibrin. (832 aa)
ENSKMAP00000004573Reverse transcriptase domain-containing protein. (1001 aa)
LOC108229423Histone H2B; Belongs to the histone H2B family. (124 aa)
babam2BRISC and BRCA1 A complex member 2. (386 aa)
slf1SMC5-SMC6 complex localization factor 1. (879 aa)
ube2nUbiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
LOC108241661Histone H2B; Belongs to the histone H2B family. (116 aa)
ENSKMAP00000006347Uncharacterized protein. (270 aa)
ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
LOC108248076Checkpoint kinase 2. (534 aa)
ENSKMAP00000008060Reverse transcriptase domain-containing protein. (975 aa)
ENSKMAP00000008309Reverse transcriptase domain-containing protein. (1265 aa)
ENSKMAP00000008333annotation not available (990 aa)
ENSKMAP00000008781Reverse transcriptase domain-containing protein. (1162 aa)
LOC108237209Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b; Belongs to the 14-3-3 family. (249 aa)
ENSKMAP00000009231Reverse transcriptase domain-containing protein. (987 aa)
ENSKMAP00000009313Methionine sulfoxide reductase B1b. (467 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1702 aa)
LOC108240030Histone H2B; Belongs to the histone H2B family. (124 aa)
LOC108240031Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ENSKMAP00000009514Reverse transcriptase domain-containing protein. (489 aa)
Rad9bRAD9 checkpoint clamp component B. (194 aa)
LOC108248126RPA_C domain-containing protein. (199 aa)
LOC108247233Histone H4. (103 aa)
LOC108241206Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide; Belongs to the 14-3-3 family. (249 aa)
ENSKMAP00000011321annotation not available (1265 aa)
rfc2Replication factor C (activator 1) 2. (357 aa)
ccnb1Cyclin B1; Belongs to the cyclin family. (397 aa)
kat5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (574 aa)
LOC108248151Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family. (257 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (696 aa)
mdc1Uncharacterized protein. (1989 aa)
recql4RecQ helicase-like 4. (1281 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
ENSKMAP00000012922Histone H2B; Belongs to the histone H2B family. (155 aa)
LOC108229777Histone H4. (103 aa)
ENSKMAP00000013203Reverse transcriptase domain-containing protein. (1258 aa)
LOC1082360233-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2; Belongs to the 14-3-3 family. (247 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (285 aa)
Brcc3BRCA1/BRCA2-containing complex, subunit 3. (263 aa)
nsd2Nuclear receptor binding SET domain protein 2. (1267 aa)
rfc4Replication factor C (activator 1) 4. (388 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (387 aa)
LOC108245856Histone H2B; Belongs to the histone H2B family. (124 aa)
rhno1Si:ch73-352p4.5. (290 aa)
ENSKMAP00000017454Reverse transcriptase domain-containing protein. (1273 aa)
rpa2RPA_C domain-containing protein. (274 aa)
exo1Exonuclease 1. (769 aa)
LOC1082339113-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 1; Belongs to the 14-3-3 family. (247 aa)
ENSKMAP00000018069Histone H2B; Belongs to the histone H2B family. (151 aa)
uimc1Uncharacterized protein. (976 aa)
ENSKMAP00000000423Reverse transcriptase domain-containing protein. (1066 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (372 aa)
rad1RAD1 homolog (S. pombe). (280 aa)
babam1BRISC and BRCA1 A complex member 1. (381 aa)
ENSKMAP00000019521Reverse transcriptase domain-containing protein. (1258 aa)
ENSKMAP00000019606Reverse transcriptase domain-containing protein. (1217 aa)
rpa3Replication protein A 14kDa subunit. (122 aa)
ENSKMAP00000020023annotation not available (828 aa)
cdk1Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (303 aa)
ENSKMAP00000020216Reverse transcriptase domain-containing protein. (796 aa)
LOC10824655114_3_3 domain-containing protein; Belongs to the 14-3-3 family. (255 aa)
ENSKMAP00000020407Reverse transcriptase domain-containing protein. (1258 aa)
LOC10824364214_3_3 domain-containing protein; Belongs to the 14-3-3 family. (244 aa)
ENSKMAP00000020635Uncharacterized protein. (178 aa)
wee1Wee1-like protein kinase. (624 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1023 aa)
cdca7Cell division cycle associated 7a. (404 aa)
ENSKMAP00000021337Reverse transcriptase domain-containing protein. (876 aa)
ENSKMAP00000021513Reverse transcriptase domain-containing protein. (1156 aa)
ENSKMAP00000021569Reverse transcriptase domain-containing protein. (1121 aa)
ENSKMAP00000029997Reverse transcriptase domain-containing protein. (1252 aa)
tdrd3Tudor domain containing 3. (787 aa)
LOC108237560Wee1-like protein kinase. (546 aa)
ENSKMAP00000028753Histone H2A; Belongs to the histone H2A family. (124 aa)
rmi1RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae). (699 aa)
ankrd12Ankyrin repeat domain 12. (1924 aa)
rmi2RecQ mediated genome instability 2. (145 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (515 aa)
ENSKMAP00000024731Uncharacterized protein. (235 aa)
ENSKMAP00000024676Reverse transcriptase domain-containing protein. (1254 aa)
ENSKMAP00000000178Reverse transcriptase domain-containing protein. (1096 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (32%) [HD]