99 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108229807	Cullin 4A; Belongs to the cullin family. (746 aa)
	ENSKMAP00000005758	Uncharacterized protein. (548 aa)
	LOC108249736	Uncharacterized protein. (556 aa)
	ENSKMAP00000005891	Uncharacterized protein. (271 aa)
	rcbtb2	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
	ENSKMAP00000006266	Uncharacterized protein. (271 aa)
	ENSKMAP00000006301	Ig-like domain-containing protein. (186 aa)
	LOC108229485	Uncharacterized protein. (544 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	rpa1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
	rfc3	Replication factor C (activator 1) 3. (356 aa)
	kxd1	KxDL motif containing 1. (185 aa)
	LOC108242873	Uncharacterized protein. (540 aa)
	ENSKMAP00000008746	Uncharacterized protein. (453 aa)
	LOC108237813	Uncharacterized protein. (544 aa)
	usp10	Ubiquitin carboxyl-terminal hydrolase. (874 aa)
	ENSKMAP00000009313	Methionine sulfoxide reductase B1b. (467 aa)
	ENSKMAP00000009683	Tripartite motif containing 25, like. (456 aa)
	LOC108248126	RPA_C domain-containing protein. (199 aa)
	LOC108247506	Uncharacterized protein. (594 aa)
	LOC108251717	Uncharacterized protein. (550 aa)
	pold4	Uncharacterized protein. (110 aa)
	poli	Polymerase (DNA directed) iota. (716 aa)
	SPATA5	Spermatogenesis associated 5. (811 aa)
	ENSKMAP00000000485	B30.2/SPRY domain-containing protein. (227 aa)
	ENSKMAP00000000933	Uncharacterized protein. (205 aa)
	usp43	Ubiquitin specific peptidase 43a; Belongs to the peptidase C19 family. (1217 aa)
	ENSKMAP00000001807	Uncharacterized protein. (498 aa)
	rev1	REV1 DNA directed polymerase. (1363 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
	ENSKMAP00000000203	Uncharacterized protein. (427 aa)
	rfc1	Replication factor C subunit 1. (1180 aa)
	rchy1	Ring finger and CHY zinc finger domain containing 1. (267 aa)
	rfc2	Replication factor C (activator 1) 2. (357 aa)
	pole3	CBFD_NFYB_HMF domain-containing protein. (153 aa)
	pold1	DNA polymerase. (1105 aa)
	LOC108245251	Bloodthirsty-related gene family, member 12. (570 aa)
	ENSKMAP00000014049	Si:dkey-46i9.6. (539 aa)
	pole2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
	ENSKMAP00000014222	B30.2/SPRY domain-containing protein. (214 aa)
	LOC108245284	Uncharacterized protein. (544 aa)
	LOC108245285	B30.2/SPRY domain-containing protein. (498 aa)
	usp1	Ubiquitin carboxyl-terminal hydrolase. (787 aa)
	LOC108244139	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (531 aa)
	ENSKMAP00000015259	Uncharacterized protein. (244 aa)
	rfc4	Replication factor C (activator 1) 4. (388 aa)
	ENSKMAP00000015730	B30.2/SPRY domain-containing protein. (218 aa)
	LOC108251500	Uncharacterized protein. (557 aa)
	rfc5	Replication factor C (activator 1) 5. (339 aa)
	nploc4	NPL4 homolog, ubiquitin recognition factor. (630 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (531 aa)
	LOC108246189	Uncharacterized protein. (436 aa)
	ddb1	Damage-specific DNA binding protein 1. (1075 aa)
	ENSKMAP00000003283	Uncharacterized protein. (419 aa)
	LOC108241677	Uncharacterized protein. (562 aa)
	LOC108241679	FinTRIM family, member 67. (456 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (471 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	ENSKMAP00000004172	Uncharacterized protein. (545 aa)
	ufd1	Ubiquitin recognition factor in ER associated degradation 1. (311 aa)
	mad2l2	Mitotic arrest deficient 2 like 2. (210 aa)
	LOC108248617	Uncharacterized protein. (544 aa)
	LOC108243241	FinTRIM family, member 14-like. (514 aa)
	polk	Polymerase (DNA directed) kappa. (401 aa)
	ubb	Uncharacterized protein. (270 aa)
	LOC108236237	Ubiquitin specific peptidase 43b; Belongs to the peptidase C19 family. (1225 aa)
	LOC108228281	Uncharacterized protein. (545 aa)
	LOC108244200	Uncharacterized protein. (549 aa)
	rpa2	RPA_C domain-containing protein. (274 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (747 aa)
	LOC108237118	USP domain-containing protein; Belongs to the peptidase C19 family. (1308 aa)
	LOC108233798	FinTRIM family, member 82. (568 aa)
	rpa3	Replication protein A 14kDa subunit. (122 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
	Pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (298 aa)
	ENSKMAP00000020750	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (314 aa)
	ENSKMAP00000021046	Uncharacterized protein. (233 aa)
	rev3l	REV3 like, DNA directed polymerase zeta catalytic subunit. (2448 aa)
	LOC108245383	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	sprtn	SprT-like N-terminal domain. (569 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (440 aa)
	LOC108229918	Si:dkey-24l11.2. (653 aa)
	LOC108247206	Uncharacterized protein. (552 aa)
	pclaf	PCNA clamp associated factor. (116 aa)
	LOC108228504	Uncharacterized protein. (544 aa)
	dtl	Denticleless E3 ubiquitin protein ligase homolog (Drosophila). (621 aa)
	ENSKMAP00000024416	Uncharacterized protein. (425 aa)
	LOC108241508	Zgc:136908; Belongs to the AAA ATPase family. (808 aa)
	LOC108232228	Uncharacterized protein. (405 aa)
	polh	Polymerase (DNA directed), eta. (738 aa)
	LOC108243733	Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family. (1290 aa)
	wdr48	WD repeat domain 48b. (677 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (869 aa)
	rad18	RAD18 E3 ubiquitin protein ligase. (490 aa)
	atad5	ATPase family AAA domain containing 5a. (1804 aa)
	pole4	Polymerase (DNA-directed), epsilon 4, accessory subunit. (130 aa)
	LOC108230590	SCY domain-containing protein. (122 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000000203	ubb	ENSKMAP00000000203	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000000485	ubb	ENSKMAP00000000485	ENSKMAP00000016559	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.408
ENSKMAP00000000933	ubb	ENSKMAP00000000933	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000001807	ubb	ENSKMAP00000001807	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000003283	ubb	ENSKMAP00000003283	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000004172	ubb	ENSKMAP00000004172	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000005758	ubb	ENSKMAP00000005758	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000005891	ubb	ENSKMAP00000005891	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000006266	ubb	ENSKMAP00000006266	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000006301	ubb	ENSKMAP00000006301	ENSKMAP00000016559	Ig-like domain-containing protein.	Uncharacterized protein.	0.408
ENSKMAP00000008746	ubb	ENSKMAP00000008746	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSKMAP00000009313	ENSKMAP00000020750	ENSKMAP00000009313	ENSKMAP00000020750	Methionine sulfoxide reductase B1b.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.646
ENSKMAP00000009313	LOC108230590	ENSKMAP00000009313	ENSKMAP00000030168	Methionine sulfoxide reductase B1b.	SCY domain-containing protein.	0.432
ENSKMAP00000009313	LOC108241508	ENSKMAP00000009313	ENSKMAP00000025241	Methionine sulfoxide reductase B1b.	Zgc:136908; Belongs to the AAA ATPase family.	0.420
ENSKMAP00000009313	LOC108248126	ENSKMAP00000009313	ENSKMAP00000010056	Methionine sulfoxide reductase B1b.	RPA_C domain-containing protein.	0.789
ENSKMAP00000009313	Pole	ENSKMAP00000009313	ENSKMAP00000020703	Methionine sulfoxide reductase B1b.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.646
ENSKMAP00000009313	SPATA5	ENSKMAP00000009313	ENSKMAP00000010734	Methionine sulfoxide reductase B1b.	Spermatogenesis associated 5.	0.420
ENSKMAP00000009313	atad5	ENSKMAP00000009313	ENSKMAP00000028595	Methionine sulfoxide reductase B1b.	ATPase family AAA domain containing 5a.	0.733
ENSKMAP00000009313	ddb1	ENSKMAP00000009313	ENSKMAP00000003119	Methionine sulfoxide reductase B1b.	Damage-specific DNA binding protein 1.	0.533
ENSKMAP00000009313	dtl	ENSKMAP00000009313	ENSKMAP00000024301	Methionine sulfoxide reductase B1b.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.490