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taf5l taf5l gtf2a2 gtf2a2 polr2g polr2g taf1 taf1 tbpl1 tbpl1 taf12 taf12 TAF4 TAF4 taf10 taf10 LOC108232507 LOC108232507 ercc3 ercc3 gtf2f2 gtf2f2 ercc2 ercc2 taf5 taf5 ENSKMAP00000028503 ENSKMAP00000028503 gtf2h1 gtf2h1 tbp tbp taf2 taf2 gtf2h3 gtf2h3 polr2b polr2b ENSKMAP00000023670 ENSKMAP00000023670 gtf2a1l gtf2a1l polr2a polr2a LOC108248915 LOC108248915 polr2c polr2c gtf2e1 gtf2e1 polr2j polr2j polr2f polr2f LOC108250675 LOC108250675 LOC108228304 LOC108228304 cdk7 cdk7 Polr2d Polr2d gtf2h5 gtf2h5 polr2h polr2h taf6 taf6 LOC108239717 LOC108239717 LOC108251031 LOC108251031 mnat1 mnat1 POLR2E POLR2E LOC112450151 LOC112450151 ccnh ccnh taf3 taf3 gtf2a1 gtf2a1 polr2l polr2l gtf2b gtf2b polr2i polr2i gtf2h4 gtf2h4 LOC108243306 LOC108243306 taf7l taf7l LOC108240442 LOC108240442 gtf2f1 gtf2f1 gtf2e2 gtf2e2 taf11 taf11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (600 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (189 aa)
taf1Transcription initiation factor TFIID subunit. (1824 aa)
tbpl1TBP-like 1. (189 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (160 aa)
TAF4TATA-box binding protein associated factor 4. (894 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (188 aa)
LOC108232507General transcription factor IIH subunit. (392 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (268 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (749 aa)
ENSKMAP00000028503PH_TFIIH domain-containing protein. (131 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (409 aa)
tbpTATA box binding protein. (304 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1215 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (299 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
ENSKMAP00000023670TAF4 domain-containing protein. (300 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (427 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1777 aa)
LOC108248915DNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (446 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (149 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC108250675TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (274 aa)
LOC108228304TATA box binding protein like 2. (310 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
Polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (177 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
LOC108239717Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC108251031TAFH domain-containing protein. (933 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
LOC112450151Uncharacterized protein. (205 aa)
ccnhCyclin H; Belongs to the cyclin family. (333 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (982 aa)
gtf2a1General transcription factor IIA, 1. (385 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
gtf2bGeneral transcription factor IIB. (224 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
LOC108243306TAFH domain-containing protein. (1037 aa)
taf7lTAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)
LOC108240442General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (261 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (204 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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