STRINGSTRING
cbfb cbfb runx3 runx3 ep300 ep300 LOC108250440 LOC108250440 LOC108228916 LOC108228916 ccnd1 ccnd1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cbfbCore-binding factor subunit beta. (188 aa)
runx3Runt-related transcription factor. (421 aa)
ep300E1A binding protein p300 b. (2785 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
ccnd1Cyclin D1; Belongs to the cyclin family. (292 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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