19 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	zdhhc5	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (522 aa)
	LOC108241350	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (351 aa)
	LOC108239664	Uncharacterized protein; Belongs to the protein kinase superfamily. (349 aa)
	plekhd1	Pleckstrin homology domain containing, family D (with coiled-coil domains) member 1. (495 aa)
	prkaca	Uncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)
	PTCHD3	Patched domain containing 3. (843 aa)
	LOC108248967	Uncharacterized protein. (2290 aa)
	abca1	ATP-binding cassette, sub-family A (ABC1), member 1A. (2243 aa)
	ENSKMAP00000029153	Uncharacterized protein. (211 aa)
	ptchd1	Patched domain containing 1. (591 aa)
	apoa4	Apolipoprotein A-Ib. (261 aa)
	abca2	ATP-binding cassette, sub-family A (ABC1), member 2. (2519 aa)
	LOC108249777	Patched domain containing 4. (925 aa)
	LOC108246340	Uncharacterized protein. (1490 aa)
	smpdl3a	Acid sphingomyelinase-like phosphodiesterase. (441 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (380 aa)
	LOC108247531	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (794 aa)
	zdhhc8	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (763 aa)
	LOC108246922	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (805 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000029153	ptchd1	ENSKMAP00000029153	ENSKMAP00000029158	Uncharacterized protein.	Patched domain containing 1.	0.898
LOC108239664	LOC108241350	ENSKMAP00000020712	ENSKMAP00000017710	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC108239664	prkaca	ENSKMAP00000020712	ENSKMAP00000025122	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108239664	prkacb	ENSKMAP00000020712	ENSKMAP00000014230	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108241350	LOC108239664	ENSKMAP00000017710	ENSKMAP00000020712	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108241350	prkaca	ENSKMAP00000017710	ENSKMAP00000025122	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108241350	prkacb	ENSKMAP00000017710	ENSKMAP00000014230	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108248967	abca1	ENSKMAP00000025849	ENSKMAP00000028469	Uncharacterized protein.	ATP-binding cassette, sub-family A (ABC1), member 1A.	0.901
LOC108248967	apoa4	ENSKMAP00000025849	ENSKMAP00000029246	Uncharacterized protein.	Apolipoprotein A-Ib.	0.497
abca1	LOC108248967	ENSKMAP00000028469	ENSKMAP00000025849	ATP-binding cassette, sub-family A (ABC1), member 1A.	Uncharacterized protein.	0.901
abca1	apoa4	ENSKMAP00000028469	ENSKMAP00000029246	ATP-binding cassette, sub-family A (ABC1), member 1A.	Apolipoprotein A-Ib.	0.497
abca2	apoa4	ENSKMAP00000003114	ENSKMAP00000029246	ATP-binding cassette, sub-family A (ABC1), member 2.	Apolipoprotein A-Ib.	0.497
apoa4	LOC108248967	ENSKMAP00000029246	ENSKMAP00000025849	Apolipoprotein A-Ib.	Uncharacterized protein.	0.497
apoa4	abca1	ENSKMAP00000029246	ENSKMAP00000028469	Apolipoprotein A-Ib.	ATP-binding cassette, sub-family A (ABC1), member 1A.	0.497
apoa4	abca2	ENSKMAP00000029246	ENSKMAP00000003114	Apolipoprotein A-Ib.	ATP-binding cassette, sub-family A (ABC1), member 2.	0.497
prkaca	LOC108239664	ENSKMAP00000025122	ENSKMAP00000020712	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
prkaca	LOC108241350	ENSKMAP00000025122	ENSKMAP00000017710	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
prkaca	prkacb	ENSKMAP00000025122	ENSKMAP00000014230	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
prkacb	LOC108239664	ENSKMAP00000014230	ENSKMAP00000020712	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
prkacb	LOC108241350	ENSKMAP00000014230	ENSKMAP00000017710	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900