39 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTCHD3	Patched domain containing 3. (843 aa)
	LOC108248967	Uncharacterized protein. (2290 aa)
	sar1b	Secretion associated, Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	abca1	ATP-binding cassette, sub-family A (ABC1), member 1A. (2243 aa)
	ENSKMAP00000029153	Uncharacterized protein. (211 aa)
	ptchd1	Patched domain containing 1. (591 aa)
	apoa4	Apolipoprotein A-Ib. (261 aa)
	LOC108230608	Uncharacterized protein. (1298 aa)
	plekhd1	Pleckstrin homology domain containing, family D (with coiled-coil domains) member 1. (495 aa)
	LOC108239664	Uncharacterized protein; Belongs to the protein kinase superfamily. (349 aa)
	LOC108246720	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	LOC108241350	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (351 aa)
	smpdl3a	Acid sphingomyelinase-like phosphodiesterase. (441 aa)
	LOC108233436	Apolipoprotein Bb, tandem duplicate 2. (3796 aa)
	apoc1	Uncharacterized protein. (79 aa)
	ENSKMAP00000016720	Apolipoprotein Eb. (264 aa)
	zdhhc5	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (522 aa)
	p4hb	Protein disulfide-isomerase. (512 aa)
	LOC108234296	Uncharacterized protein. (1565 aa)
	LOC108234328	Uncharacterized protein. (1700 aa)
	Apob	Vitellogenin domain-containing protein. (439 aa)
	ENSKMAP00000014558	Uncharacterized protein. (408 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (380 aa)
	LOC108234300	Vitellogenin 3, phosvitinless. (1253 aa)
	LOC108247531	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (794 aa)
	LOC108246922	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (805 aa)
	zdhhc8	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (763 aa)
	LOC108235282	Protein disulfide-isomerase. (578 aa)
	LOC108246340	Uncharacterized protein. (1490 aa)
	LOC108249777	Patched domain containing 4. (925 aa)
	LOC108250392	Apolipoprotein Ea. (251 aa)
	abca2	ATP-binding cassette, sub-family A (ABC1), member 2. (2519 aa)
	ENSKMAP00000002434	Vitellogenin domain-containing protein. (1289 aa)
	mttp	Microsomal triglyceride transfer protein. (886 aa)
	ENSKMAP00000023087	Vitellogenin domain-containing protein. (500 aa)
	ENSKMAP00000023100	Uncharacterized protein. (389 aa)
	LOC108242881	Secretion associated, Ras related GTPase 1Ab; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	LOC108229267	Uncharacterized protein. (1208 aa)
	prkaca	Uncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apob	ENSKMAP00000014558	ENSKMAP00000014600	ENSKMAP00000014558	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.910
Apob	ENSKMAP00000016720	ENSKMAP00000014600	ENSKMAP00000016720	Vitellogenin domain-containing protein.	Apolipoprotein Eb.	0.726
Apob	ENSKMAP00000023100	ENSKMAP00000014600	ENSKMAP00000023100	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.519
Apob	LOC108235282	ENSKMAP00000014600	ENSKMAP00000009284	Vitellogenin domain-containing protein.	Protein disulfide-isomerase.	0.561
Apob	LOC108250392	ENSKMAP00000014600	ENSKMAP00000007405	Vitellogenin domain-containing protein.	Apolipoprotein Ea.	0.641
Apob	apoa4	ENSKMAP00000014600	ENSKMAP00000029246	Vitellogenin domain-containing protein.	Apolipoprotein A-Ib.	0.776
Apob	apoc1	ENSKMAP00000014600	ENSKMAP00000016734	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.413
Apob	mttp	ENSKMAP00000014600	ENSKMAP00000000147	Vitellogenin domain-containing protein.	Microsomal triglyceride transfer protein.	0.841
Apob	p4hb	ENSKMAP00000014600	ENSKMAP00000015791	Vitellogenin domain-containing protein.	Protein disulfide-isomerase.	0.533
ENSKMAP00000002434	ENSKMAP00000016720	ENSKMAP00000002434	ENSKMAP00000016720	Vitellogenin domain-containing protein.	Apolipoprotein Eb.	0.619
ENSKMAP00000002434	LOC108235282	ENSKMAP00000002434	ENSKMAP00000009284	Vitellogenin domain-containing protein.	Protein disulfide-isomerase.	0.408
ENSKMAP00000002434	LOC108250392	ENSKMAP00000002434	ENSKMAP00000007405	Vitellogenin domain-containing protein.	Apolipoprotein Ea.	0.619
ENSKMAP00000002434	apoa4	ENSKMAP00000002434	ENSKMAP00000029246	Vitellogenin domain-containing protein.	Apolipoprotein A-Ib.	0.768
ENSKMAP00000002434	apoc1	ENSKMAP00000002434	ENSKMAP00000016734	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.413
ENSKMAP00000002434	mttp	ENSKMAP00000002434	ENSKMAP00000000147	Vitellogenin domain-containing protein.	Microsomal triglyceride transfer protein.	0.822
ENSKMAP00000002434	p4hb	ENSKMAP00000002434	ENSKMAP00000015791	Vitellogenin domain-containing protein.	Protein disulfide-isomerase.	0.408
ENSKMAP00000014558	Apob	ENSKMAP00000014558	ENSKMAP00000014600	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.910
ENSKMAP00000014558	ENSKMAP00000016720	ENSKMAP00000014558	ENSKMAP00000016720	Uncharacterized protein.	Apolipoprotein Eb.	0.743
ENSKMAP00000014558	ENSKMAP00000023087	ENSKMAP00000014558	ENSKMAP00000023087	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.699
ENSKMAP00000014558	LOC108235282	ENSKMAP00000014558	ENSKMAP00000009284	Uncharacterized protein.	Protein disulfide-isomerase.	0.561