STRINGSTRING
rnf139 rnf139 marchf4 marchf4 LOC108238666 LOC108238666 uggt2 uggt2 MARCHF9 MARCHF9 MARCHF6 MARCHF6 LOC108241416 LOC108241416 uggt1 uggt1 ubb ubb ENSKMAP00000016431 ENSKMAP00000016431 LOC108232532 LOC108232532 rnf103 rnf103 marchf11 marchf11 man1b1 man1b1 edem3 edem3 rps27a rps27a LOC108248016 LOC108248016 uba52 uba52 marchf1 marchf1 marchf8 marchf8 kxd1 kxd1 marchf2 marchf2 edem1 edem1 marchf7 marchf7 LOC108239428 LOC108239428
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnf139Ring finger protein 139. (715 aa)
marchf4Membrane-associated ring finger (C3HC4) 4. (391 aa)
LOC108238666RING-CH-type domain-containing protein. (922 aa)
uggt2UDP-glucose glycoprotein glucosyltransferase 2. (1526 aa)
MARCHF9Membrane associated ring-CH-type finger 9. (302 aa)
MARCHF6Membrane associated ring-CH-type finger 6. (914 aa)
LOC108241416alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (672 aa)
uggt1UDP-glucose glycoprotein glucosyltransferase 1. (1581 aa)
ubbUncharacterized protein. (270 aa)
ENSKMAP00000016431RING-CH-type domain-containing protein. (234 aa)
LOC108232532alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (862 aa)
rnf103Ring finger protein 103. (710 aa)
marchf11Membrane-associated ring finger (C3HC4) 11. (332 aa)
man1b1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (632 aa)
edem3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (897 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC108248016Membrane-associated ring finger (C3HC4) 9. (336 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
marchf1Membrane-associated ring finger (C3HC4) 1. (563 aa)
marchf8Membrane-associated ring finger (C3HC4) 8. (287 aa)
kxd1KxDL motif containing 1. (185 aa)
marchf2Membrane-associated ring finger (C3HC4) 2. (247 aa)
edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (639 aa)
marchf7Membrane associated ring-CH-type finger 7. (769 aa)
LOC108239428RING-CH-type domain-containing protein. (248 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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