36 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rbmx	RNA binding motif protein X-linked. (387 aa)
	vim	Vimentin like; Belongs to the intermediate filament family. (460 aa)
	LOC108240497	CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1364 aa)
	cops2	COP9 signalosome subunit 2. (443 aa)
	spen	Spen family transcriptional repressor. (3545 aa)
	scaf4	Uncharacterized protein. (1191 aa)
	LOC108236028	SR-related CTD-associated factor 4b. (757 aa)
	cirbp	Cold inducible RNA binding protein b. (174 aa)
	cct7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (546 aa)
	LOC108230199	RB binding protein 6, ubiquitin ligase. (1861 aa)
	txnl1	Thioredoxin-like 1. (289 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (536 aa)
	myo6	Myosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1253 aa)
	rock2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1377 aa)
	LOC108250516	Uncharacterized protein. (201 aa)
	cops4	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
	LOC108242320	E3 ubiquitin protein ligase. (1020 aa)
	LOC108245289	RRM domain-containing protein. (309 aa)
	tra2b	Transformer 2 beta homolog. (295 aa)
	ENSKMAP00000016812	RRM domain-containing protein. (297 aa)
	SCAF8	SR-related CTD associated factor 8. (1372 aa)
	ENSKMAP00000018563	PWI domain-containing protein. (90 aa)
	stk38	Non-specific serine/threonine protein kinase. (395 aa)
	cpsf6	Cleavage and polyadenylation specific factor 6. (582 aa)
	gps1	G protein pathway suppressor 1. (487 aa)
	ENSKMAP00000021072	RALY heterogeneous nuclear ribonucleoprotein. (243 aa)
	pde5a	Phosphodiesterase. (882 aa)
	rbbp6	RING-type domain-containing protein. (1441 aa)
	ENSKMAP00000023972	DWNN domain-containing protein. (158 aa)
	LOC108230459	RRM domain-containing protein. (292 aa)
	LOC108232945	RRM domain-containing protein. (320 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	LOC108235702	Si:ch1073-335m2.2. (3212 aa)
	LOC108232982	RALY RNA binding protein like. (286 aa)
	ENSKMAP00000002005	Uncharacterized protein. (44 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	LOC108240497	ENSKMAP00000027871	ENSKMAP00000002393	Cullin 3; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.900
CUL3	cct2	ENSKMAP00000027871	ENSKMAP00000010115	Cullin 3; Belongs to the cullin family.	Chaperonin containing TCP1, subunit 2 (beta).	0.499
CUL3	cct7	ENSKMAP00000027871	ENSKMAP00000008996	Cullin 3; Belongs to the cullin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.543
CUL3	cops2	ENSKMAP00000027871	ENSKMAP00000005030	Cullin 3; Belongs to the cullin family.	COP9 signalosome subunit 2.	0.851
CUL3	cops4	ENSKMAP00000027871	ENSKMAP00000013167	Cullin 3; Belongs to the cullin family.	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.837
CUL3	gps1	ENSKMAP00000027871	ENSKMAP00000020748	Cullin 3; Belongs to the cullin family.	G protein pathway suppressor 1.	0.891
CUL3	txnl1	ENSKMAP00000027871	ENSKMAP00000009631	Cullin 3; Belongs to the cullin family.	Thioredoxin-like 1.	0.402
ENSKMAP00000002005	cct2	ENSKMAP00000002005	ENSKMAP00000010115	Uncharacterized protein.	Chaperonin containing TCP1, subunit 2 (beta).	0.461
ENSKMAP00000002005	cct7	ENSKMAP00000002005	ENSKMAP00000008996	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.512
ENSKMAP00000016812	ENSKMAP00000018563	ENSKMAP00000016812	ENSKMAP00000018563	RRM domain-containing protein.	PWI domain-containing protein.	0.575
ENSKMAP00000016812	LOC108232945	ENSKMAP00000016812	ENSKMAP00000024643	RRM domain-containing protein.	RRM domain-containing protein.	0.646
ENSKMAP00000016812	LOC108245289	ENSKMAP00000016812	ENSKMAP00000014917	RRM domain-containing protein.	RRM domain-containing protein.	0.646
ENSKMAP00000016812	cct2	ENSKMAP00000016812	ENSKMAP00000010115	RRM domain-containing protein.	Chaperonin containing TCP1, subunit 2 (beta).	0.415
ENSKMAP00000016812	cct7	ENSKMAP00000016812	ENSKMAP00000008996	RRM domain-containing protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.434
ENSKMAP00000016812	cirbp	ENSKMAP00000016812	ENSKMAP00000007868	RRM domain-containing protein.	Cold inducible RNA binding protein b.	0.566
ENSKMAP00000016812	rbmx	ENSKMAP00000016812	ENSKMAP00000002298	RRM domain-containing protein.	RNA binding motif protein X-linked.	0.663
ENSKMAP00000018563	ENSKMAP00000016812	ENSKMAP00000018563	ENSKMAP00000016812	PWI domain-containing protein.	RRM domain-containing protein.	0.575
ENSKMAP00000018563	cct7	ENSKMAP00000018563	ENSKMAP00000008996	PWI domain-containing protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.460
ENSKMAP00000018563	cpsf6	ENSKMAP00000018563	ENSKMAP00000019893	PWI domain-containing protein.	Cleavage and polyadenylation specific factor 6.	0.639
ENSKMAP00000018563	tra2b	ENSKMAP00000018563	ENSKMAP00000016442	PWI domain-containing protein.	Transformer 2 beta homolog.	0.575