STRINGSTRING
zc3h12b zc3h12b LOC108231826 LOC108231826 ENSKMAP00000026427 ENSKMAP00000026427 LOC108241482 LOC108241482 LOC108231827 LOC108231827 usf2 usf2 tbp tbp carm1 carm1 LOC108247325 LOC108247325 LOC108247324 LOC108247324 ENSKMAP00000028753 ENSKMAP00000028753 LOC108243856 LOC108243856 LOC108244406 LOC108244406 gtf2f2 gtf2f2 LOC108237473 LOC108237473 LOC108236886 LOC108236886 greb1 greb1 hsp90ab1 hsp90ab1 nrip1 nrip1 kank2 kank2 polr2b polr2b LOC108242586 LOC108242586 ncoa1 ncoa1 ENSKMAP00000022629 ENSKMAP00000022629 ENSKMAP00000022580 ENSKMAP00000022580 ENSKMAP00000022564 ENSKMAP00000022564 gtf2a1l gtf2a1l LOC108235086 LOC108235086 polr2a polr2a LOC108248915 LOC108248915 LOC108244831 LOC108244831 polr2c polr2c atf2 atf2 ENSKMAP00000021156 ENSKMAP00000021156 ENSKMAP00000021154 ENSKMAP00000021154 ep300 ep300 gata3 gata3 polr2j polr2j fkbp4 fkbp4 zc3h12d zc3h12d LOC108247643 LOC108247643 ENSKMAP00000019155 ENSKMAP00000019155 polr2f polr2f LOC108239071 LOC108239071 LOC108243116 LOC108243116 LOC108242438 LOC108242438 zc3h12a zc3h12a ENSKMAP00000018069 ENSKMAP00000018069 ccnt1 ccnt1 LOC108228304 LOC108228304 ENSKMAP00000017838 ENSKMAP00000017838 cbfb cbfb foxa2 foxa2 LOC108236140 LOC108236140 LOC108232068 LOC108232068 LOC108249382 LOC108249382 LOC108231934 LOC108231934 tbpl1 tbpl1 ENSKMAP00000016395 ENSKMAP00000016395 sp1 sp1 myb myb LOC108244152 LOC108244152 LOC108245856 LOC108245856 DDX5 DDX5 polr2g polr2g ENSKMAP00000014713 ENSKMAP00000014713 gtf2a2 gtf2a2 Polr2d Polr2d LOC108237764 LOC108237764 kdm1a kdm1a kank1 kank1 ENSKMAP00000013110 ENSKMAP00000013110 LOC108229777 LOC108229777 ENSKMAP00000012922 ENSKMAP00000012922 esr1 esr1 kat5 kat5 trps1 trps1 ENSKMAP00000011726 ENSKMAP00000011726 ENSKMAP00000011188 ENSKMAP00000011188 polr2h polr2h ENSKMAP00000010962 ENSKMAP00000010962 ENSKMAP00000010784 ENSKMAP00000010784 ENSKMAP00000010652 ENSKMAP00000010652 LOC108247233 LOC108247233 LOC108248710 LOC108248710 LOC108239717 LOC108239717 ncoa2 ncoa2 LOC108240031 LOC108240031 LOC108240030 LOC108240030 ENSKMAP00000009348 ENSKMAP00000009348 LOC108234360 LOC108234360 LOC108250440 LOC108250440 LOC108236794 LOC108236794 LOC108244561 LOC108244561 usf1 usf1 POLR2E POLR2E LOC108238347 LOC108238347 cdk9 cdk9 prmt1 prmt1 H2AZ1 H2AZ1 kank3 kank3 LOC112450151 LOC112450151 ENSKMAP00000006891 ENSKMAP00000006891 JUND JUND kat2b kat2b ENSKMAP00000006625 ENSKMAP00000006625 ENSKMAP00000006394 ENSKMAP00000006394 LOC108241661 LOC108241661 ENSKMAP00000005396 ENSKMAP00000005396 pgr pgr greb1l greb1l LOC108229423 LOC108229423 gtf2a1 gtf2a1 polr2l polr2l ebag9 ebag9 LOC108228693 LOC108228693 ENSKMAP00000003646 ENSKMAP00000003646 znf217 znf217 LOC108242801 LOC108242801 H3-3B H3-3B LOC108228646 LOC108228646 polr2i polr2i cxxc4 cxxc4 LOC108240442 LOC108240442 gtf2f1 gtf2f1 YY1 YY1 pou2f1 pou2f1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
zc3h12bZinc finger CCCH-type containing 12B. (845 aa)
LOC108231826Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (732 aa)
ENSKMAP00000026427Histone domain-containing protein. (134 aa)
LOC108241482CREB binding protein a. (2490 aa)
LOC108231827Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (724 aa)
usf2BHLH domain-containing protein. (318 aa)
tbpTATA box binding protein. (304 aa)
carm1Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (581 aa)
LOC108247325Histone H3.3. (136 aa)
LOC108247324Histone domain-containing protein. (153 aa)
ENSKMAP00000028753Histone H2A; Belongs to the histone H2A family. (124 aa)
LOC108243856Nuclear receptor coactivator. (1504 aa)
LOC108244406Nuclear receptor coactivator 3. (1518 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (268 aa)
LOC108237473Protein arginine methyltransferase 8; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (362 aa)
LOC108236886CXXC finger protein 5a. (279 aa)
greb1Growth regulating estrogen receptor binding 1. (1781 aa)
hsp90ab1HATPase_c domain-containing protein. (722 aa)
nrip1Nuclear receptor interacting protein 1b. (1092 aa)
kank2KN motif and ankyrin repeat domains 2. (1027 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC108242586KN motif and ankyrin repeat domains 1b. (1248 aa)
ncoa1Nuclear receptor coactivator 1. (1473 aa)
ENSKMAP00000022629Histone domain-containing protein. (97 aa)
ENSKMAP00000022580Histone H3; Belongs to the histone H3 family. (127 aa)
ENSKMAP00000022564Histone H2B; Belongs to the histone H2B family. (168 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (427 aa)
LOC108235086Protein arginine methyltransferase 8b; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (325 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1777 aa)
LOC108248915DNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
LOC108244831JunD proto-oncogene, AP-1 transcription factor subunit. (269 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
atf2Activating transcription factor 2. (515 aa)
ENSKMAP00000021156Histone domain-containing protein. (123 aa)
ENSKMAP00000021154Uncharacterized protein. (91 aa)
ep300E1A binding protein p300 b. (2785 aa)
gata3GATA binding protein 3. (441 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (149 aa)
fkbp4Peptidylprolyl isomerase. (453 aa)
zc3h12dC3H1-type domain-containing protein. (518 aa)
LOC108247643CREB binding protein b. (2428 aa)
ENSKMAP00000019155Histone H2A; Belongs to the histone H2A family. (137 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC108239071Histone H3; Belongs to the histone H3 family. (142 aa)
LOC108243116Histone H3.3. (136 aa)
LOC108242438V-fos FBJ murine osteosarcoma viral oncogene homolog Ab. (366 aa)
zc3h12aZinc finger CCCH-type containing 12A. (619 aa)
ENSKMAP00000018069Histone H2B; Belongs to the histone H2B family. (151 aa)
ccnt1Cyclin T1; Belongs to the cyclin family. (699 aa)
LOC108228304TATA box binding protein like 2. (310 aa)
ENSKMAP00000017838Uncharacterized protein. (267 aa)
cbfbCore-binding factor subunit beta. (188 aa)
foxa2Forkhead box A2. (415 aa)
LOC108236140DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (618 aa)
LOC108232068Uncharacterized protein. (1520 aa)
LOC108249382RUNX family transcription factor 1. (257 aa)
LOC108231934Prostaglandin E synthase 3b (cytosolic). (159 aa)
tbpl1TBP-like 1. (189 aa)
ENSKMAP00000016395Upstream transcription factor 2, c-fos interacting. (310 aa)
sp1Sp1 transcription factor. (702 aa)
mybV-myb avian myeloblastosis viral oncogene homolog. (606 aa)
LOC108244152C3H1-type domain-containing protein. (915 aa)
LOC108245856Histone H2B; Belongs to the histone H2B family. (124 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (634 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (189 aa)
ENSKMAP00000014713ANK_REP_REGION domain-containing protein. (80 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
Polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (177 aa)
LOC108237764Histone domain-containing protein. (123 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (837 aa)
kank1KN motif and ankyrin repeat domains 1. (1287 aa)
ENSKMAP00000013110Histone domain-containing protein. (113 aa)
LOC108229777Histone H4. (103 aa)
ENSKMAP00000012922Histone H2B; Belongs to the histone H2B family. (155 aa)
esr1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (643 aa)
kat5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (574 aa)
trps1Trichorhinophalangeal syndrome I. (1525 aa)
ENSKMAP00000011726Histone H2A; Belongs to the histone H2A family. (134 aa)
ENSKMAP00000011188Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (319 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSKMAP00000010962Histone H2A; Belongs to the histone H2A family. (134 aa)
ENSKMAP00000010784annotation not available (146 aa)
ENSKMAP00000010652Histone H2A; Belongs to the histone H2A family. (146 aa)
LOC108247233Histone H4. (103 aa)
LOC108248710Fork-head domain-containing protein. (411 aa)
LOC108239717Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
ncoa2Nuclear receptor coactivator. (1424 aa)
LOC108240031Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC108240030Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSKMAP00000009348Histone H2A; Belongs to the histone H2A family. (135 aa)
LOC108234360Lysine (K)-specific demethylase 4B. (1269 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
LOC108236794YY1 transcription factor. (346 aa)
LOC108244561Prostaglandin E synthase 3a (cytosolic). (159 aa)
usf1Upstream transcription factor 1. (299 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
LOC108238347ANK_REP_REGION domain-containing protein. (853 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
prmt1Protein arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (347 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
kank3KN motif and ankyrin repeat domains 3. (982 aa)
LOC112450151Uncharacterized protein. (205 aa)
ENSKMAP00000006891Histone domain-containing protein. (104 aa)
JUNDBZIP domain-containing protein. (292 aa)
kat2bHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (792 aa)
ENSKMAP00000006625Histone domain-containing protein. (132 aa)
ENSKMAP00000006394Histone domain-containing protein. (99 aa)
LOC108241661Histone H2B; Belongs to the histone H2B family. (116 aa)
ENSKMAP00000005396Histone domain-containing protein. (158 aa)
pgrProgesterone receptor. (659 aa)
greb1lGREB1 like retinoic acid receptor coactivator. (1945 aa)
LOC108229423Histone H2B; Belongs to the histone H2B family. (124 aa)
gtf2a1General transcription factor IIA, 1. (385 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
ebag9Estrogen receptor binding site associated antigen 9; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases. (216 aa)
LOC108228693Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (183 aa)
ENSKMAP00000003646Uncharacterized protein; Belongs to the histone H2B family. (148 aa)
znf217Zinc finger protein 217. (961 aa)
LOC108242801Histone H2A; Belongs to the histone H2A family. (132 aa)
H3-3BHistone H3; Belongs to the histone H3 family. (136 aa)
LOC108228646Si:dkey-206d17.12. (261 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
cxxc4CXXC finger 4. (289 aa)
LOC108240442General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (261 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
YY1YY1 transcription factor b. (368 aa)
pou2f1POU domain protein. (710 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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