50 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	myo9b	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1844 aa)
	basp1	Brain abundant, membrane attached signal protein 1. (176 aa)
	LOC108245009	Uncharacterized protein. (1027 aa)
	LOC108230774	Uncharacterized protein. (517 aa)
	LOC108230773	Uncharacterized protein. (518 aa)
	SYDE1	Synapse defective Rho GTPase homolog 1. (941 aa)
	LOC108243331	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (194 aa)
	LOC108237668	ANK_REP_REGION domain-containing protein. (355 aa)
	snap25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
	LOC108235467	Zgc:158689. (656 aa)
	VANGL1	Vang-like protein. (527 aa)
	Arhgap5	Rho GTPase activating protein 5. (808 aa)
	LOC108243442	Family with sequence similarity 169 member B. (374 aa)
	ENSKMAP00000008483	Rho-GAP domain-containing protein. (158 aa)
	LOC108241217	RAB7a, member RAS oncogene family. (207 aa)
	rhof	Ras homolog family member F. (236 aa)
	baiap2l1	BAI1-associated protein 2-like 1a. (447 aa)
	LOC108244554	Uncharacterized protein. (375 aa)
	akap12	A kinase (PRKA) anchor protein 12b. (1433 aa)
	arhgap39	Rho GTPase activating protein 39. (1010 aa)
	LOC108244140	Sosondowah ankyrin repeat domain family Cb. (476 aa)
	ENSKMAP00000014329	ANK_REP_REGION domain-containing protein. (458 aa)
	LOC108245850	Uncharacterized protein. (375 aa)
	LOC108230867	BAI1-associated protein 2-like 2b. (386 aa)
	LOC108248208	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
	LOC108250594	Uncharacterized protein. (1085 aa)
	lmnb1	Lamin B1; Belongs to the intermediate filament family. (584 aa)
	arhgap1	Rho GTPase activating protein 1. (430 aa)
	snap23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (213 aa)
	LOC108239631	Rho GTPase activating protein 21b. (1792 aa)
	DIAPH1	Diaphanous related formin 1. (1127 aa)
	VAMP3	Vesicle associated membrane protein 3. (102 aa)
	srgap2	SLIT-ROBO Rho GTPase activating protein 2. (1130 aa)
	actb	Uncharacterized protein. (375 aa)
	LOC108236106	BAI1-associated protein 2-like 2a. (428 aa)
	FARP1	FERM, ARH/RhoGEF and pleckstrin domain protein 1. (1040 aa)
	LOC108238096	Melanoma cell adhesion molecule a. (617 aa)
	LOC108235788	Extended synaptotagmin-like protein 1b. (1448 aa)
	arhgap21	Rho GTPase activating protein 21a. (2058 aa)
	diaph2	Diaphanous-related formin 2. (1123 aa)
	LOC108235796	Uncharacterized protein. (206 aa)
	LOC108239334	BAI1-associated protein 2-like 1b. (508 aa)
	LOC108235698	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (166 aa)
	cav3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (152 aa)
	sowahc	Sosondowah ankyrin repeat domain family Ca. (529 aa)
	LOC108244405	Zgc:92107. (1144 aa)
	LOC108235294	Extended synaptotagmin-like protein 1a. (988 aa)
	capzb	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (277 aa)
	DEPDC1B	DEP domain containing 1B. (523 aa)
	diaph3	Diaphanous-related formin 3. (1074 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arhgap5	ENSKMAP00000008483	ENSKMAP00000007070	ENSKMAP00000008483	Rho GTPase activating protein 5.	Rho-GAP domain-containing protein.	0.900
Arhgap5	rhof	ENSKMAP00000007070	ENSKMAP00000010454	Rho GTPase activating protein 5.	Ras homolog family member F.	0.562
DEPDC1B	myo9b	ENSKMAP00000029498	ENSKMAP00000029998	DEP domain containing 1B.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.555
DIAPH1	LOC108243442	ENSKMAP00000017466	ENSKMAP00000008158	Diaphanous related formin 1.	Family with sequence similarity 169 member B.	0.415
DIAPH1	LOC108244554	ENSKMAP00000017466	ENSKMAP00000011618	Diaphanous related formin 1.	Uncharacterized protein.	0.406
DIAPH1	LOC108245850	ENSKMAP00000017466	ENSKMAP00000014330	Diaphanous related formin 1.	Uncharacterized protein.	0.406
DIAPH1	actb	ENSKMAP00000017466	ENSKMAP00000021536	Diaphanous related formin 1.	Uncharacterized protein.	0.406
DIAPH1	arhgap1	ENSKMAP00000017466	ENSKMAP00000016515	Diaphanous related formin 1.	Rho GTPase activating protein 1.	0.505
DIAPH1	capzb	ENSKMAP00000017466	ENSKMAP00000029099	Diaphanous related formin 1.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.516
DIAPH1	myo9b	ENSKMAP00000017466	ENSKMAP00000029998	Diaphanous related formin 1.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.516
DIAPH1	rhof	ENSKMAP00000017466	ENSKMAP00000010454	Diaphanous related formin 1.	Ras homolog family member F.	0.675
DIAPH1	srgap2	ENSKMAP00000017466	ENSKMAP00000019592	Diaphanous related formin 1.	SLIT-ROBO Rho GTPase activating protein 2.	0.416
ENSKMAP00000008483	Arhgap5	ENSKMAP00000008483	ENSKMAP00000007070	Rho-GAP domain-containing protein.	Rho GTPase activating protein 5.	0.900
ENSKMAP00000008483	rhof	ENSKMAP00000008483	ENSKMAP00000010454	Rho-GAP domain-containing protein.	Ras homolog family member F.	0.562
FARP1	capzb	ENSKMAP00000022581	ENSKMAP00000029099	FERM, ARH/RhoGEF and pleckstrin domain protein 1.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.460
FARP1	rhof	ENSKMAP00000022581	ENSKMAP00000010454	FERM, ARH/RhoGEF and pleckstrin domain protein 1.	Ras homolog family member F.	0.467
LOC108230773	rhof	ENSKMAP00000001553	ENSKMAP00000010454	Uncharacterized protein.	Ras homolog family member F.	0.447
LOC108230774	rhof	ENSKMAP00000001535	ENSKMAP00000010454	Uncharacterized protein.	Ras homolog family member F.	0.447
LOC108230867	LOC108243442	ENSKMAP00000014422	ENSKMAP00000008158	BAI1-associated protein 2-like 2b.	Family with sequence similarity 169 member B.	0.406
LOC108230867	capzb	ENSKMAP00000014422	ENSKMAP00000029099	BAI1-associated protein 2-like 2b.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.428