45 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108230313	Charged multivesicular body protein 4C. (233 aa)
	chmp2b	Charged multivesicular body protein 2Bb. (215 aa)
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (521 aa)
	vps36	Vacuolar protein sorting 36 homolog. (382 aa)
	ZFYVE1	Uncharacterized protein. (786 aa)
	bag1	Charged multivesicular body protein 5a. (220 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	LOC108236471	Multivesicular body subunit 12Bb. (245 aa)
	LOC108239997	Zgc:123278. (184 aa)
	LOC108245598	Charged multivesicular body protein 6. (207 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	chmp2a	Charged multivesicular body protein 2A. (220 aa)
	snf8	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (412 aa)
	tm9sf1	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (717 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	chmp3	Charged multivesicular body protein 3. (220 aa)
	stam2	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (514 aa)
	kxd1	KxDL motif containing 1. (185 aa)
	vps28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (223 aa)
	vps25	Vacuolar protein sorting 25 homolog. (176 aa)
	vta1	Vesicle (multivesicular body) trafficking 1. (241 aa)
	vps37b	Zgc:114173. (283 aa)
	LOC108241312	Charged multivesicular body protein 6a. (207 aa)
	CHMP4B	Charged multivesicular body protein 4B. (222 aa)
	ubb	Uncharacterized protein. (270 aa)
	LOC108243620	Si:ch211-284f22.3. (302 aa)
	mvb12b	Multivesicular body subunit 12Ba. (297 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (779 aa)
	UBAP1L	Ubiquitin associated protein 1 like. (375 aa)
	VPS4B-2	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (508 aa)
	LOC108230516	Charged multivesicular body protein 5b. (220 aa)
	zfyve19	Zinc finger, FYVE domain containing 19. (426 aa)
	LOC108243665	Charged multivesicular body protein 4Bb. (221 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (440 aa)
	ENSKMAP00000022332	Uncharacterized protein. (71 aa)
	LOC108250095	VPS37C subunit of ESCRT-I. (350 aa)
	zfyve1	Zinc finger, FYVE domain containing 1. (775 aa)
	ubap1	Ubiquitin associated protein 1. (462 aa)
	mvb12a	Uncharacterized protein. (290 aa)
	chmp7	Charged multivesicular body protein 7. (450 aa)
	LOC108247315	Si:ch211-11n16.2. (655 aa)
	vps37a	VPS37A subunit of ESCRT-I. (393 aa)
	cunh17orf75	Zgc:153240. (361 aa)
	LOC108229872	Ubiquitin associated protein 1-like a. (383 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHMP4B	LOC108230516	ENSKMAP00000016062	ENSKMAP00000020440	Charged multivesicular body protein 4B.	Charged multivesicular body protein 5b.	0.832
CHMP4B	LOC108236471	ENSKMAP00000016062	ENSKMAP00000002460	Charged multivesicular body protein 4B.	Multivesicular body subunit 12Bb.	0.558
CHMP4B	LOC108239997	ENSKMAP00000016062	ENSKMAP00000002471	Charged multivesicular body protein 4B.	Zgc:123278.	0.659
CHMP4B	LOC108241312	ENSKMAP00000016062	ENSKMAP00000015714	Charged multivesicular body protein 4B.	Charged multivesicular body protein 6a.	0.851
CHMP4B	LOC108243620	ENSKMAP00000016062	ENSKMAP00000016655	Charged multivesicular body protein 4B.	Si:ch211-284f22.3.	0.483
CHMP4B	LOC108245598	ENSKMAP00000016062	ENSKMAP00000002562	Charged multivesicular body protein 4B.	Charged multivesicular body protein 6.	0.851
CHMP4B	LOC108250095	ENSKMAP00000016062	ENSKMAP00000022409	Charged multivesicular body protein 4B.	VPS37C subunit of ESCRT-I.	0.538
CHMP4B	VPS4B	ENSKMAP00000016062	ENSKMAP00000005792	Charged multivesicular body protein 4B.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.823
CHMP4B	VPS4B-2	ENSKMAP00000016062	ENSKMAP00000017631	Charged multivesicular body protein 4B.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.823
CHMP4B	bag1	ENSKMAP00000016062	ENSKMAP00000001968	Charged multivesicular body protein 4B.	Charged multivesicular body protein 5a.	0.833
CHMP4B	chmp2a	ENSKMAP00000016062	ENSKMAP00000005694	Charged multivesicular body protein 4B.	Charged multivesicular body protein 2A.	0.941
CHMP4B	chmp2b	ENSKMAP00000016062	ENSKMAP00000000496	Charged multivesicular body protein 4B.	Charged multivesicular body protein 2Bb.	0.830
CHMP4B	chmp3	ENSKMAP00000016062	ENSKMAP00000006820	Charged multivesicular body protein 4B.	Charged multivesicular body protein 3.	0.948
CHMP4B	chmp7	ENSKMAP00000016062	ENSKMAP00000026604	Charged multivesicular body protein 4B.	Charged multivesicular body protein 7.	0.982
CHMP4B	cunh17orf75	ENSKMAP00000016062	ENSKMAP00000028505	Charged multivesicular body protein 4B.	Zgc:153240.	0.755
CHMP4B	hgs	ENSKMAP00000016062	ENSKMAP00000017337	Charged multivesicular body protein 4B.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.481
CHMP4B	mvb12a	ENSKMAP00000016062	ENSKMAP00000026220	Charged multivesicular body protein 4B.	Uncharacterized protein.	0.503
CHMP4B	mvb12b	ENSKMAP00000016062	ENSKMAP00000016807	Charged multivesicular body protein 4B.	Multivesicular body subunit 12Ba.	0.558
CHMP4B	rps27a	ENSKMAP00000016062	ENSKMAP00000004139	Charged multivesicular body protein 4B.	Ribosomal protein S27a.	0.594
CHMP4B	snf8	ENSKMAP00000016062	ENSKMAP00000005762	Charged multivesicular body protein 4B.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.867