6 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	irf7	Interferon regulatory factor 7. (438 aa)
	LOC108241482	CREB binding protein a. (2490 aa)
	LOC108237204	Interferon regulatory factor 3. (455 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	LOC108247643	CREB binding protein b. (2428 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108237204	LOC108241482	ENSKMAP00000021182	ENSKMAP00000026436	Interferon regulatory factor 3.	CREB binding protein a.	0.958
LOC108237204	LOC108247643	ENSKMAP00000021182	ENSKMAP00000019200	Interferon regulatory factor 3.	CREB binding protein b.	0.958
LOC108237204	LOC108250440	ENSKMAP00000021182	ENSKMAP00000008734	Interferon regulatory factor 3.	E1A binding protein p300 a.	0.926
LOC108237204	ep300	ENSKMAP00000021182	ENSKMAP00000020640	Interferon regulatory factor 3.	E1A binding protein p300 b.	0.926
LOC108237204	irf7	ENSKMAP00000021182	ENSKMAP00000002692	Interferon regulatory factor 3.	Interferon regulatory factor 7.	0.868
LOC108241482	LOC108237204	ENSKMAP00000026436	ENSKMAP00000021182	CREB binding protein a.	Interferon regulatory factor 3.	0.958
LOC108241482	LOC108247643	ENSKMAP00000026436	ENSKMAP00000019200	CREB binding protein a.	CREB binding protein b.	0.901
LOC108241482	LOC108250440	ENSKMAP00000026436	ENSKMAP00000008734	CREB binding protein a.	E1A binding protein p300 a.	0.928
LOC108241482	ep300	ENSKMAP00000026436	ENSKMAP00000020640	CREB binding protein a.	E1A binding protein p300 b.	0.992
LOC108241482	irf7	ENSKMAP00000026436	ENSKMAP00000002692	CREB binding protein a.	Interferon regulatory factor 7.	0.733
LOC108247643	LOC108237204	ENSKMAP00000019200	ENSKMAP00000021182	CREB binding protein b.	Interferon regulatory factor 3.	0.958
LOC108247643	LOC108241482	ENSKMAP00000019200	ENSKMAP00000026436	CREB binding protein b.	CREB binding protein a.	0.901
LOC108247643	LOC108250440	ENSKMAP00000019200	ENSKMAP00000008734	CREB binding protein b.	E1A binding protein p300 a.	0.928
LOC108247643	ep300	ENSKMAP00000019200	ENSKMAP00000020640	CREB binding protein b.	E1A binding protein p300 b.	0.992
LOC108247643	irf7	ENSKMAP00000019200	ENSKMAP00000002692	CREB binding protein b.	Interferon regulatory factor 7.	0.733
LOC108250440	LOC108237204	ENSKMAP00000008734	ENSKMAP00000021182	E1A binding protein p300 a.	Interferon regulatory factor 3.	0.926
LOC108250440	LOC108241482	ENSKMAP00000008734	ENSKMAP00000026436	E1A binding protein p300 a.	CREB binding protein a.	0.928
LOC108250440	LOC108247643	ENSKMAP00000008734	ENSKMAP00000019200	E1A binding protein p300 a.	CREB binding protein b.	0.928
LOC108250440	irf7	ENSKMAP00000008734	ENSKMAP00000002692	E1A binding protein p300 a.	Interferon regulatory factor 7.	0.703
ep300	LOC108237204	ENSKMAP00000020640	ENSKMAP00000021182	E1A binding protein p300 b.	Interferon regulatory factor 3.	0.926