STRINGSTRING
vdac1 vdac1 LOC108247966 LOC108247966 map1lc3a map1lc3a LOC108236391 LOC108236391 LOC108249623 LOC108249623 LOC108247290 LOC108247290 cetn3 cetn3 sqstm1 sqstm1 LOC108249566 LOC108249566 LOC108249557 LOC108249557 atg5 atg5 LOC108241910 LOC108241910 LOC108241492 LOC108241492 LOC108241936 LOC108241936 tomm70 tomm70 usp30 usp30 LOC108250086 LOC108250086 LOC108231707 LOC108231707 LOC108240747 LOC108240747 LOC108245360 LOC108245360 ENSKMAP00000019988 ENSKMAP00000019988 SRC SRC ENSKMAP00000019423 ENSKMAP00000019423 LOC108239677 LOC108239677 LOC108251201 LOC108251201 ift88 ift88 mfn2 mfn2 LOC108235081 LOC108235081 LOC108247626 LOC108247626 LOC108247625 LOC108247625 LOC108231715 LOC108231715 ulk1 ulk1 LOC108241334 LOC108241334 csnk2b csnk2b LOC108235288 LOC108235288 ubb ubb tomm40 tomm40 TOMM20 TOMM20 LOC108249343 LOC108249343 LOC108246436 LOC108246436 ILRUN ILRUN ENSKMAP00000013933 ENSKMAP00000013933 TUBE1 TUBE1 fundc1 fundc1 LOC108251789 LOC108251789 tomm5 tomm5 vim vim TOMM7 TOMM7 LOC108237634 LOC108237634 LOC108241883 LOC108241883 Prkn Prkn ENSKMAP00000003164 ENSKMAP00000003164 ulk2 ulk2 rps27a rps27a LOC108233582 LOC108233582 pink1 pink1 TUBA1A TUBA1A ube2n ube2n cftr cftr fndc3a fndc3a uba52 uba52 LOC108249182 LOC108249182 LOC108228792 LOC108228792 LOC108228793 LOC108228793 LOC108250395 LOC108250395 ENSKMAP00000007495 ENSKMAP00000007495 nbr1 nbr1 kxd1 kxd1 ENSKMAP00000008188 ENSKMAP00000008188 mterf3 mterf3 fndc3b fndc3b LOC108251018 LOC108251018 ENSKMAP00000009679 ENSKMAP00000009679 csnk2a2 csnk2a2 LOC108247505 LOC108247505 LOC108236604 LOC108236604 tomm6 tomm6 LOC108239494 LOC108239494 pex5 pex5 TUBB4B TUBB4B LOC108249847 LOC108249847 pgam5 pgam5 LOC108235438 LOC108235438 LOC108228966 LOC108228966 park7 park7 ENSKMAP00000013280 ENSKMAP00000013280 LOC108237038 LOC108237038 pex5l pex5l mfn1 mfn1 ENSKMAP00000029729 ENSKMAP00000029729 tomm22 tomm22 LOC108242657 LOC108242657 LOC108240438 LOC108240438 LOC108240406 LOC108240406 DYNC1I1 DYNC1I1 LOC108247312 LOC108247312 LOC108236914 LOC108236914 ENSKMAP00000000467 ENSKMAP00000000467 Atm Atm dync1li2 dync1li2 arl13b arl13b LOC108234222 LOC108234222
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vdac1Voltage-dependent anion channel 1. (283 aa)
LOC108247966Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (151 aa)
LOC108236391Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (473 aa)
LOC108249623Zgc:109986. (263 aa)
LOC108247290Dynein light chain. (89 aa)
cetn3Centrin 3. (172 aa)
sqstm1Sequestosome 1. (430 aa)
LOC108249566Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
LOC108249557Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (491 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
LOC108241910Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
LOC108241492Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (518 aa)
LOC108241936Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (576 aa)
usp30Ubiquitin carboxyl-terminal hydrolase. (522 aa)
LOC108250086Microtubule-associated protein 1 light chain 3 beta. (128 aa)
LOC108231707Inflammation and lipid regulator with UBA-like and NBR1-like domains. (283 aa)
LOC108240747Dynein, cytoplasmic 1, intermediate chain 2a. (636 aa)
LOC108245360NBR1 autophagy cargo receptor b. (812 aa)
ENSKMAP00000019988Tubulin domain-containing protein; Belongs to the tubulin family. (198 aa)
SRCTyrosine-protein kinase. (550 aa)
ENSKMAP00000019423Uncharacterized protein. (183 aa)
LOC108239677Tubulin domain-containing protein. (136 aa)
LOC108251201Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily. (393 aa)
ift88Intraflagellar transport 88 homolog. (839 aa)
mfn2Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (670 aa)
LOC108235081UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
LOC108247626Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
LOC108247625Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC108231715Tubulin domain-containing protein. (135 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1019 aa)
LOC108241334Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
csnk2bCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
LOC108235288Pericentrin. (3589 aa)
ubbUncharacterized protein. (270 aa)
tomm40Translocase of outer mitochondrial membrane 40 homolog (yeast). (341 aa)
TOMM20Translocase of outer mitochondrial membrane 20. (147 aa)
LOC108249343Uncharacterized protein. (158 aa)
LOC108246436Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (434 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (287 aa)
ENSKMAP00000013933Uncharacterized protein. (116 aa)
TUBE1Tubulin epsilon 1; Belongs to the tubulin family. (253 aa)
fundc1Uncharacterized protein. (150 aa)
LOC108251789Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
tomm5Translocase of outer mitochondrial membrane 5 homolog (yeast). (51 aa)
vimVimentin like; Belongs to the intermediate filament family. (460 aa)
TOMM7Translocase of outer mitochondrial membrane 7. (109 aa)
LOC108237634Tyrosine-protein kinase. (549 aa)
LOC108241883Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (485 aa)
PrknRBR-type E3 ubiquitin transferase. (174 aa)
ENSKMAP00000003164Ubiquitin-like domain-containing protein. (142 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1033 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC108233582Dynein light chain. (89 aa)
pink1PTEN induced kinase 1. (576 aa)
TUBA1ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
ube2nUbiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1303 aa)
fndc3aFibronectin type III domain containing 3A. (1238 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC108249182Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC108228792Fzo_mitofusin domain-containing protein. (362 aa)
LOC108228793Peroxisomal biogenesis factor 5-like b. (557 aa)
LOC108250395Translocase of outer mitochondrial membrane 40 homolog, like. (328 aa)
ENSKMAP00000007495Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (317 aa)
nbr1NBR1 autophagy cargo receptor a. (1060 aa)
kxd1KxDL motif containing 1. (185 aa)
ENSKMAP00000008188Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
mterf3Mitochondrial transcription termination factor 3. (424 aa)
fndc3bFibronectin type III domain containing 3Ba. (896 aa)
LOC108251018Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
ENSKMAP00000009679Uncharacterized protein. (70 aa)
csnk2a2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (350 aa)
LOC108247505Translocase of outer mitochondrial membrane 20b. (146 aa)
LOC108236604Centrin 4. (173 aa)
tomm6Translocase of outer mitochondrial membrane 6 homolog (yeast). (64 aa)
LOC108239494Dynein, cytoplasmic 1, intermediate chain 2b. (729 aa)
pex5Peroxisomal biogenesis factor 5. (680 aa)
TUBB4BTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
LOC108249847Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (350 aa)
pgam5PGAM family member 5, serine/threonine protein phosphatase, mitochondrial. (300 aa)
LOC108235438Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
LOC108228966Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
park7Parkinson protein 7. (189 aa)
ENSKMAP00000013280A kinase (PRKA) anchor protein 9. (2630 aa)
LOC108237038Uncharacterized protein. (331 aa)
pex5lPeroxisomal biogenesis factor 5-like a. (621 aa)
mfn1Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (758 aa)
ENSKMAP00000029729TMEM189_B_dmain domain-containing protein. (156 aa)
tomm22Translocase of outer mitochondrial membrane 22 homolog (yeast). (133 aa)
LOC108242657Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
LOC108240438Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC108240406Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (644 aa)
LOC108247312Unc-51 like autophagy activating kinase 1a. (919 aa)
LOC108236914Dynein light chain. (89 aa)
ENSKMAP00000000467TAN domain-containing protein. (123 aa)
AtmUncharacterized protein. (130 aa)
dync1li2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (490 aa)
arl13bADP-ribosylation factor-like 13b. (408 aa)
LOC108234222Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (435 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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