15 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108231707	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (283 aa)
	usp30	Ubiquitin carboxyl-terminal hydrolase. (522 aa)
	sqstm1	Sequestosome 1. (430 aa)
	pex5l	Peroxisomal biogenesis factor 5-like a. (621 aa)
	ENSKMAP00000000467	TAN domain-containing protein. (123 aa)
	Atm	Uncharacterized protein. (130 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC108228793	Peroxisomal biogenesis factor 5-like b. (557 aa)
	nbr1	NBR1 autophagy cargo receptor a. (1060 aa)
	kxd1	KxDL motif containing 1. (185 aa)
	pex5	Peroxisomal biogenesis factor 5. (680 aa)
	ILRUN	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (287 aa)
	ubb	Uncharacterized protein. (270 aa)
	LOC108245360	NBR1 autophagy cargo receptor b. (812 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atm	ENSKMAP00000000467	ENSKMAP00000000507	ENSKMAP00000000467	Uncharacterized protein.	TAN domain-containing protein.	0.926
Atm	LOC108228793	ENSKMAP00000000507	ENSKMAP00000006955	Uncharacterized protein.	Peroxisomal biogenesis factor 5-like b.	0.571
Atm	LOC108245360	ENSKMAP00000000507	ENSKMAP00000020461	Uncharacterized protein.	NBR1 autophagy cargo receptor b.	0.931
Atm	nbr1	ENSKMAP00000000507	ENSKMAP00000007784	Uncharacterized protein.	NBR1 autophagy cargo receptor a.	0.931
Atm	pex5	ENSKMAP00000000507	ENSKMAP00000011382	Uncharacterized protein.	Peroxisomal biogenesis factor 5.	0.657
Atm	pex5l	ENSKMAP00000000507	ENSKMAP00000029853	Uncharacterized protein.	Peroxisomal biogenesis factor 5-like a.	0.571
Atm	rps27a	ENSKMAP00000000507	ENSKMAP00000004139	Uncharacterized protein.	Ribosomal protein S27a.	0.591
Atm	sqstm1	ENSKMAP00000000507	ENSKMAP00000024409	Uncharacterized protein.	Sequestosome 1.	0.959
Atm	ubb	ENSKMAP00000000507	ENSKMAP00000016559	Uncharacterized protein.	Uncharacterized protein.	0.627
ENSKMAP00000000467	Atm	ENSKMAP00000000467	ENSKMAP00000000507	TAN domain-containing protein.	Uncharacterized protein.	0.926
ENSKMAP00000000467	LOC108228793	ENSKMAP00000000467	ENSKMAP00000006955	TAN domain-containing protein.	Peroxisomal biogenesis factor 5-like b.	0.571
ENSKMAP00000000467	LOC108245360	ENSKMAP00000000467	ENSKMAP00000020461	TAN domain-containing protein.	NBR1 autophagy cargo receptor b.	0.931
ENSKMAP00000000467	nbr1	ENSKMAP00000000467	ENSKMAP00000007784	TAN domain-containing protein.	NBR1 autophagy cargo receptor a.	0.931
ENSKMAP00000000467	pex5	ENSKMAP00000000467	ENSKMAP00000011382	TAN domain-containing protein.	Peroxisomal biogenesis factor 5.	0.571
ENSKMAP00000000467	pex5l	ENSKMAP00000000467	ENSKMAP00000029853	TAN domain-containing protein.	Peroxisomal biogenesis factor 5-like a.	0.571
ENSKMAP00000000467	rps27a	ENSKMAP00000000467	ENSKMAP00000004139	TAN domain-containing protein.	Ribosomal protein S27a.	0.591
ENSKMAP00000000467	sqstm1	ENSKMAP00000000467	ENSKMAP00000024409	TAN domain-containing protein.	Sequestosome 1.	0.610
ENSKMAP00000000467	ubb	ENSKMAP00000000467	ENSKMAP00000016559	TAN domain-containing protein.	Uncharacterized protein.	0.627
ILRUN	LOC108228793	ENSKMAP00000014285	ENSKMAP00000006955	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	Peroxisomal biogenesis factor 5-like b.	0.507
ILRUN	LOC108245360	ENSKMAP00000014285	ENSKMAP00000020461	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	NBR1 autophagy cargo receptor b.	0.531