STRINGSTRING
xpa xpa ercc3 ercc3 ercc6 ercc6 noa1 noa1 nod1 nod1 msh6 msh6 kmo kmo actr5 actr5 LOC108250425 LOC108250425 ripk2 ripk2 crygs crygs adcy7 adcy7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xpaXeroderma pigmentosum, complementation group A. (275 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
ercc6Excision repair cross-complementation group 6. (1442 aa)
noa1Nitric oxide associated 1. (641 aa)
nod1Nucleotide-binding oligomerization domain containing 1. (599 aa)
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1388 aa)
kmoKynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. (471 aa)
actr5Actin related protein 5; Belongs to the actin family. (642 aa)
LOC108250425Uncharacterized protein. (715 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (581 aa)
crygsCrystallin, gamma S2; Belongs to the beta/gamma-crystallin family. (174 aa)
adcy7Adenylate cyclase type 7; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1096 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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