STRINGSTRING
rfc1 rfc1 RPA1 RPA1 mlh3 mlh3 pold2 pold2 pcna pcna rpa1 rpa1 rfc3 rfc3 LOC108248126 LOC108248126 pold4 pold4 pms2 pms2 rfc2 rfc2 mlh1 mlh1 pold1 pold1 rfc4 rfc4 msh2 msh2 rpa2 rpa2 ssbp1 ssbp1 rpa3 rpa3 msh6 msh6 pold3 pold3 lig1 lig1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfc1Replication factor C subunit 1. (1180 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
mlh3MutL homolog 3 (E. coli). (1121 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (471 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
LOC108248126RPA_C domain-containing protein. (199 aa)
pold4Uncharacterized protein. (110 aa)
pms2PMS1 homolog 2, mismatch repair system component. (857 aa)
rfc2Replication factor C (activator 1) 2. (357 aa)
mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (726 aa)
pold1DNA polymerase. (1105 aa)
rfc4Replication factor C (activator 1) 4. (388 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (934 aa)
rpa2RPA_C domain-containing protein. (274 aa)
ssbp1Single-stranded DNA binding protein 1. (146 aa)
rpa3Replication protein A 14kDa subunit. (122 aa)
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1388 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (440 aa)
lig1DNA ligase. (1010 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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