11 items (Arabidopsis thaliana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS11A	40S ribosomal protein S11-1. (160 aa)
	RPS20A	40S ribosomal protein S20-1; Belongs to the universal ribosomal protein uS10 family. (124 aa)
	RPS13A	40S ribosomal protein S13-1; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	RPSaA	40S ribosomal protein Sa-1; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family. (298 aa)
	RPS29A	40S ribosomal protein S29. (56 aa)
	RPS19C	40S ribosomal protein S19-3; Belongs to the eukaryotic ribosomal protein eS19 family. (143 aa)
	RPS21B	40S ribosomal protein S21-1; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	RPS12A	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family. (144 aa)
	RPS17C	40S ribosomal protein S17-3; Belongs to the eukaryotic ribosomal protein eS17 family. (140 aa)
	RPS28A	40S ribosomal protein S28-1; Belongs to the eukaryotic ribosomal protein eS28 family. (64 aa)
	RPS24A	40S ribosomal protein S24-1; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPS11A	RPS12A	P16181	Q9S9P1	40S ribosomal protein S11-1.	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	0.997
RPS11A	RPS13A	P16181	P59223	40S ribosomal protein S11-1.	40S ribosomal protein S13-1; Belongs to the universal ribosomal protein uS15 family.	0.996
RPS11A	RPS17C	P16181	Q9SQZ1	40S ribosomal protein S11-1.	40S ribosomal protein S17-3; Belongs to the eukaryotic ribosomal protein eS17 family.	0.993
RPS11A	RPS19C	P16181	Q9FNP8	40S ribosomal protein S11-1.	40S ribosomal protein S19-3; Belongs to the eukaryotic ribosomal protein eS19 family.	0.996
RPS11A	RPS20A	P16181	P49200	40S ribosomal protein S11-1.	40S ribosomal protein S20-1; Belongs to the universal ribosomal protein uS10 family.	0.996
RPS11A	RPS21B	P16181	Q9M337	40S ribosomal protein S11-1.	40S ribosomal protein S21-1; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999
RPS11A	RPS24A	P16181	Q9SS17	40S ribosomal protein S11-1.	40S ribosomal protein S24-1; Belongs to the eukaryotic ribosomal protein eS24 family.	0.997
RPS11A	RPS28A	P16181	Q9SR73	40S ribosomal protein S11-1.	40S ribosomal protein S28-1; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
RPS11A	RPS29A	P16181	Q680P8	40S ribosomal protein S11-1.	40S ribosomal protein S29.	0.999
RPS11A	RPSaA	P16181	Q08682	40S ribosomal protein S11-1.	40S ribosomal protein Sa-1; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family.	0.997
RPS12A	RPS11A	Q9S9P1	P16181	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S11-1.	0.997
RPS12A	RPS13A	Q9S9P1	P59223	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S13-1; Belongs to the universal ribosomal protein uS15 family.	0.997
RPS12A	RPS17C	Q9S9P1	Q9SQZ1	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S17-3; Belongs to the eukaryotic ribosomal protein eS17 family.	0.995
RPS12A	RPS19C	Q9S9P1	Q9FNP8	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S19-3; Belongs to the eukaryotic ribosomal protein eS19 family.	0.997
RPS12A	RPS20A	Q9S9P1	P49200	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S20-1; Belongs to the universal ribosomal protein uS10 family.	0.997
RPS12A	RPS21B	Q9S9P1	Q9M337	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S21-1; Belongs to the eukaryotic ribosomal protein eS21 family.	0.998
RPS12A	RPS24A	Q9S9P1	Q9SS17	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S24-1; Belongs to the eukaryotic ribosomal protein eS24 family.	0.998
RPS12A	RPS28A	Q9S9P1	Q9SR73	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S28-1; Belongs to the eukaryotic ribosomal protein eS28 family.	0.998
RPS12A	RPS29A	Q9S9P1	Q680P8	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S29.	0.999
RPS12A	RPSaA	Q9S9P1	Q08682	40S ribosomal protein S12-1; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein Sa-1; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family.	0.999