STRINGSTRING
F23A5.7 F23A5.7 A0A1I9LLN7 A0A1I9LLN7 A0A1I9LMD5 A0A1I9LMD5 EHD2 EHD2 AT4G12840.1 AT4G12840.1 AAE1 AAE1 F24O1.14 F24O1.14 T23J18.14 T23J18.14 NET2D NET2D SOUL-1 SOUL-1 F4JB65_ARATH F4JB65_ARATH AP22.58 AP22.58 T25K17.7 T25K17.7 MXE10.1 MXE10.1 K7B16.5 K7B16.5 F4KHN5_ARATH F4KHN5_ARATH C7A10.60 C7A10.60 F19F24.9 F19F24.9 UREG UREG WDR55 WDR55 NPY2 NPY2 F8D20.200 F8D20.200 T7N9.11 T7N9.11 CLC-G CLC-G T6K21.120 T6K21.120 T17B22.14 T17B22.14 RALFL31 RALFL31 PSAT PSAT T29A15.110 T29A15.110 MAP2B MAP2B URED URED F10M6.170 F10M6.170 T25B24.1 T25B24.1 F18O9.60 F18O9.60 F6A4.100 F6A4.100 SCPL1 SCPL1 ERD2B ERD2B GUX3 GUX3 ARL8C ARL8C NTMC2T6.1 NTMC2T6.1 F18O21_80 F18O21_80 NIK3 NIK3 F14L17.11 F14L17.11 F24J13.16 F24J13.16 EHD1 EHD1 F15H21.4 F15H21.4 F19K6.8 F19K6.8 CRK3 CRK3 K18J17.19 K18J17.19 MVA3.12 MVA3.12 T6A9.6 T6A9.6 F14F8.160 F14F8.160 PCMP-E93 PCMP-E93 Q9LK30_ARATH Q9LK30_ARATH F8L10.9 F8L10.9 CYP72A13 CYP72A13 LRX6 LRX6 RH9 RH9 PELPK1 PELPK1 F9G14_170 F9G14_170 F9G14.10 F9G14.10 T10O8.170 T10O8.170 UMAMIT30 UMAMIT30 T2O9.60 T2O9.60 T14D3.100 T14D3.100 ROPGEF11 ROPGEF11 F23A5.4 F23A5.4 F3M18.16 F3M18.16 F3M18.5 F3M18.5 PI4KG7 PI4KG7 TMK3 TMK3 T1B3.11 T1B3.11 URE URE F6D8.16 F6D8.16 UGT76E4 UGT76E4 ASAT1 ASAT1 PRP4 PRP4 UREF UREF F15K20.10 F15K20.10
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
F23A5.7Mitochondrial glycoprotein family protein. (242 aa)
A0A1I9LLN7Transmembrane protein, putative (DUF707). (419 aa)
A0A1I9LMD5Integrin-linked protein kinase family. (534 aa)
EHD2EH domain-containing protein 2; Involved in endocytosis negative regulation, probably by influencing actin organization. Acts in early endocytic membrane fusion and membrane trafficking of recycling endosomes. Exhibits an inhibitory effect on endocytosis when over-expressed. (546 aa)
AT4G12840.1GTPase Der (DUF707). (395 aa)
AAE1Probable acyl-activating enzyme 1, peroxisomal; May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs; Belongs to the ATP-dependent AMP-binding enzyme family. (556 aa)
F24O1.14MIF4G domain-containing protein. (223 aa)
T23J18.14Pentatricopeptide repeat (PPR) superfamily protein. (150 aa)
NET2DProtein NETWORKED 2D; Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex. (947 aa)
SOUL-1SOUL heme-binding family protein. (246 aa)
F4JB65_ARATHFilament-like protein (DUF869). (704 aa)
AP22.58Uncharacterized protein. (610 aa)
T25K17.7Haloacid dehalogenase-like hydrolase (HAD) superfamily protein. (1057 aa)
MXE10.1Plasma-membrane choline transporter family protein; Belongs to the CTL (choline transporter-like) family. (569 aa)
K7B16.5Nuclear polyadenylated RNA-binding protein. (282 aa)
F4KHN5_ARATHP-loop containing nucleoside triphosphate hydrolases superfamily protein. (829 aa)
C7A10.60Maternal effect embryo arrest 59. (173 aa)
F19F24.9Protein kinase superfamily protein; Belongs to the protein kinase superfamily. (392 aa)
UREGUrease accessory protein G; Required for the maturation and activation of urease via the functional incorporation of the urease nickel metallocenter. Belongs to the SIMIBI class G3E GTPase family. UreG subfamily. (275 aa)
WDR55WD repeat-containing protein 55; Required for male and female gametogenesis, seed development, and embryo and endosperm development at early stages. Involved in the establishment of bilateral symmetry in the transition from the globular to the heart embryo stage. May act in the frame of a CRL4 complex. Required for proper vegetative growth and organization of the adult plant body. May play a role in hormonal control of plant development. Belongs to the WD repeat WDR55 family. (353 aa)
NPY2BTB/POZ domain-containing protein NPY2; May act as a substrate-specific adapter of an E3 ubiquitin- protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). May play an essential role in auxin-mediated organogenesis and in root gravitropic responses; Belongs to the NPH3 family. (634 aa)
F8D20.200Uncharacterized protein AT4g35690. (284 aa)
T7N9.11Uncharacterized protein At1g27050. (205 aa)
CLC-GPutative chloride channel-like protein CLC-g; Putative voltage-gated chloride channel. (765 aa)
T6K21.120Tetratricopeptide repeat (TPR)-like superfamily protein. (274 aa)
T17B22.14At3g03170. (156 aa)
RALFL31Protein RALF-like 31; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity). (113 aa)
PSATPhospholipid--sterol O-acyltransferase; Involved in lipid catabolism. Essential for sterol esters biosynthesis in leaves and seeds, but not in flowers. Plays a role in controlling the free sterol content of leaves. Catalyzes the transacylation of acyl groups from phospholipids to a variety of different sterols. Prefers phosphatidylethanolamine over phosphatidylcholine as an acyl donor. Not active toward neutral lipids. Highly specific for position sn-2, which in plant lipids is essentially devoid of saturated acyl groups. Broad sterol specificity (cholesterol > campesterol > sitosterol [...] (633 aa)
T29A15.110Intracellular protein transporter. (325 aa)
MAP2BMethionine aminopeptidase 2B; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (439 aa)
UREDUrease accessory protein D; Required for the maturation and activation of urease via the functional incorporation of the urease nickel metallocenter. Belongs to the UreD family. (294 aa)
F10M6.170Myosin heavy chain-related protein. (783 aa)
T25B24.1Protein kinase superfamily protein. (621 aa)
F18O9.60RNA binding (RRM/RBD/RNP motifs) family protein. (267 aa)
F6A4.100Stress response NST1-like protein. (240 aa)
SCPL1Serine carboxypeptidase-like 1; Probable carboxypeptidase. (441 aa)
ERD2BER lumen protein-retaining receptor B; Determines the specificity of the luminal endoplasmic reticulum protein retention system. Required for the retro-transport of calreticulin-3 (CRT3) from the Golgi to the ER. Specifically required for elongation factor Tu receptor (EFR) function in response to the pathogen-associated molecular pattern (PAMP) elf18. Belongs to the ERD2 family. (215 aa)
GUX3Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3; May be involved in the substitutions of the xylan backbone in stem glucuronoxylan. (618 aa)
ARL8CADP-ribosylation factor-like protein 8c; May play a role in lysosome motility. May play a role in chromosome segregation. (184 aa)
NTMC2T6.1C2 domain-containing protein At1g53590. (751 aa)
F18O21_80tRNA (guanine(37)-N1)-methyltransferase 1; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family. (468 aa)
NIK3Protein NSP-INTERACTING KINASE 3; Involved in defense response to geminivirus infection. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (632 aa)
F14L17.11RNA-binding (RRM/RBD/RNP motifs) family protein. (244 aa)
F24J13.16F-box protein At1g70590. (351 aa)
EHD1EH domain-containing protein 1; Involved in endocytosis positive regulation. Acts in early endocytic membrane fusion and membrane trafficking of recycling endosomes. Confers salt tolerance. (545 aa)
F15H21.4Myosin heavy chain-like protein. (555 aa)
F19K6.8C-type lectin receptor-like tyrosine-protein kinase At1g52310; Belongs to the protein kinase superfamily. Tyr protein kinase family. (552 aa)
CRK3Cysteine-rich receptor-like protein kinase 3. (646 aa)
K18J17.19Mitochondrial glycoprotein family protein. (259 aa)
MVA3.12AAA-ATPase At5g17760; Belongs to the AAA ATPase family. BCS1 subfamily. (505 aa)
T6A9.6Pentatricopeptide repeat-containing protein At1g02370, mitochondrial. (537 aa)
F14F8.160Pollen Ole e 1 allergen and extensin family protein. (401 aa)
PCMP-E93Pentatricopeptide repeat-containing protein At3g18970; Belongs to the PPR family. PCMP-E subfamily. (472 aa)
Q9LK30_ARATHS-adenosyl-L-methionine-dependent methyltransferases superfamily protein. (410 aa)
F8L10.9Protein kinase superfamily protein. (694 aa)
CYP72A13Cytochrome P450 72A13. (512 aa)
LRX6Leucine-rich repeat extensin-like protein 6; Modulates cell morphogenesis by regulating cell wall formation and assembly, and/or growth polarization. (470 aa)
RH9DEAD-box ATP-dependent RNA helicase 9, mitochondrial. (610 aa)
PELPK1Protein PELPK1; Positive regulator of germination and plant growth. (370 aa)
F9G14_170Pentatricopeptide repeat-containing protein At5g02860; Belongs to the PPR family. P subfamily. (819 aa)
F9G14.10Putative F-box/LRR-repeat protein At5g02700. (456 aa)
T10O8.170LIMR family protein At5g01460. (509 aa)
UMAMIT30WAT1-related protein At4g01450; Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family. (361 aa)
T2O9.60RING/U-box superfamily protein. (306 aa)
T14D3.100Putative membrane lipoprotein. (91 aa)
ROPGEF11Rop guanine nucleotide exchange factor 11; Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP. Functions as a light-signaling switch that functions in root growth and development through the activation of Rop in a phytochrome-dependent manner. May act as a negative regulator of phytochrome-mediated primary root development. (543 aa)
F23A5.4PPPDE putative thiol peptidase family protein. (231 aa)
F3M18.16GATA zinc finger protein. (335 aa)
F3M18.5Optic atrophy 3 protein (OPA3). (171 aa)
PI4KG7Phosphatidylinositol 4-kinase gamma 7; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3) (By similarity). Undergoes autophosphorylation and phosphorylates serine/threonine residues of protein substrates. (650 aa)
TMK3Receptor-like kinase TMK3; Involved in auxin signal transduction and cell expansion and proliferation regulation. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (943 aa)
T1B3.11CASP-like protein 5A2; Belongs to the Casparian strip membrane proteins (CASP) family. (179 aa)
UREUrease; Urea hydrolase involved in nitrogen recycling from ureide, purine, and arginine catabolism. (838 aa)
F6D8.16Pentatricopeptide repeat-containing protein At1g52620; Belongs to the PPR family. P subfamily. (819 aa)
UGT76E4UDP-glycosyltransferase 76E4; Belongs to the UDP-glycosyltransferase family. (452 aa)
ASAT1Acyl-CoA--sterol O-acyltransferase 1; Involved in the esterification of cycloartenol. Not implicated in the formation of sterol esters in flowers or during seed maturation. Has a substrate preference toward saturated fatty acyl donors (16:0 > 18:0 > 16:1 > 18:1). Does not require triacyglycerols (TAGs) as a fatty acyl donor, and is unable to acylate diacylglycerol to produce TAG. (345 aa)
PRP4Proline-rich protein 4. (448 aa)
UREFUrease accessory protein F; Required for the maturation and activation of urease via the functional incorporation of the urease nickel metallocenter. (240 aa)
F15K20.10Pentatricopeptide repeat-containing protein At2g27800, mitochondrial. (442 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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