10 items (Arabidopsis thaliana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MEE39	Probable LRR receptor-like serine/threonine-protein kinase MEE39; Receptor-like serine/threonine-kinase required during the endosperm development in seeds; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (878 aa)
	F3F9.9	Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family. (404 aa)
	LRR-RLK-4	Leucine-rich repeat protein kinase family protein. (773 aa)
	F20D22.2	Leucine-rich repeat protein kinase family protein. (1112 aa)
	F26P21.70	Probable protein phosphatase 2C 61. (326 aa)
	F2P9.21	Alpha/beta-Hydrolases superfamily protein. (704 aa)
	F7A10.8	Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein. (676 aa)
	CRRSP59	Cysteine-rich repeat secretory protein 59. (287 aa)
	ATL80	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily. (197 aa)
	CRRSP29	Cysteine-rich repeat secretory protein 29. (256 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATL80	CRRSP29	Q9LM69	Q9LRK8	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Cysteine-rich repeat secretory protein 29.	0.574
ATL80	CRRSP59	Q9LM69	Q9FHD3	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Cysteine-rich repeat secretory protein 59.	0.739
ATL80	F20D22.2	Q9LM69	O64486	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Leucine-rich repeat protein kinase family protein.	0.720
ATL80	F26P21.70	Q9LM69	O82637	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Probable protein phosphatase 2C 61.	0.720
ATL80	F2P9.21	Q9LM69	Q949N8	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Alpha/beta-Hydrolases superfamily protein.	0.758
ATL80	F3F9.9	Q9LM69	F4IA77	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family.	0.897
ATL80	F7A10.8	Q9LM69	Q9C890	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein.	0.739
ATL80	LRR-RLK-4	Q9LM69	O22178	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Leucine-rich repeat protein kinase family protein.	0.726
ATL80	MEE39	Q9LM69	C0LGP2	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	Probable LRR receptor-like serine/threonine-protein kinase MEE39; Receptor-like serine/threonine-kinase required during the endosperm development in seeds; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.405
CRRSP29	ATL80	Q9LRK8	Q9LM69	Cysteine-rich repeat secretory protein 29.	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	0.574
CRRSP29	F20D22.2	Q9LRK8	O64486	Cysteine-rich repeat secretory protein 29.	Leucine-rich repeat protein kinase family protein.	0.718
CRRSP29	F26P21.70	Q9LRK8	O82637	Cysteine-rich repeat secretory protein 29.	Probable protein phosphatase 2C 61.	0.735
CRRSP29	F2P9.21	Q9LRK8	Q949N8	Cysteine-rich repeat secretory protein 29.	Alpha/beta-Hydrolases superfamily protein.	0.739
CRRSP29	F3F9.9	Q9LRK8	F4IA77	Cysteine-rich repeat secretory protein 29.	Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family.	0.724
CRRSP29	F7A10.8	Q9LRK8	Q9C890	Cysteine-rich repeat secretory protein 29.	Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein.	0.898
CRRSP29	LRR-RLK-4	Q9LRK8	O22178	Cysteine-rich repeat secretory protein 29.	Leucine-rich repeat protein kinase family protein.	0.697
CRRSP29	MEE39	Q9LRK8	C0LGP2	Cysteine-rich repeat secretory protein 29.	Probable LRR receptor-like serine/threonine-protein kinase MEE39; Receptor-like serine/threonine-kinase required during the endosperm development in seeds; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.790
CRRSP59	ATL80	Q9FHD3	Q9LM69	Cysteine-rich repeat secretory protein 59.	RING-H2 finger protein ATL80; May be involved in the early steps of the plant defense signaling pathway; Belongs to the RING-type zinc finger family. ATL subfamily.	0.739
CRRSP59	F20D22.2	Q9FHD3	O64486	Cysteine-rich repeat secretory protein 59.	Leucine-rich repeat protein kinase family protein.	0.785
CRRSP59	F26P21.70	Q9FHD3	O82637	Cysteine-rich repeat secretory protein 59.	Probable protein phosphatase 2C 61.	0.798