STRINGSTRING
F6A14.19 F6A14.19 REN1 REN1 F26P21.40 F26P21.40 JGB JGB Q0WKW1_ARATH Q0WKW1_ARATH F27F5.22 F27F5.22 ROPGAP7 ROPGAP7 M3E9.200 M3E9.200 RL2-2 RL2-2 F14O13.5 F14O13.5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6A14.19DNAJ heat shock N-terminal domain-containing protein. (738 aa)
REN1Rho GTPase-activating protein REN1; Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. Maintains the global inactivation of ARAC11/ROP1 at the apex in pollen tubes in order to regulate the polar cell growth. (920 aa)
F26P21.40Glycine-rich protein. (1432 aa)
JGBProtein JINGUBANG; Negative regulator of pollen germination. Prevents pollination in moist environments by inhibiting jasmonic acid synthesis. Stabilizes pollen tube growth. (465 aa)
Q0WKW1_ARATHPHD finger family protein. (779 aa)
F27F5.22Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase. (643 aa)
ROPGAP7Rho GTPase-activating protein 7; Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. (870 aa)
M3E9.200Antitermination NusB domain-containing protein. (301 aa)
RL2-2Protein ROOT HAIR DEFECTIVE 3 homolog 2; Probable GTP-binding protein that may be involved in cell development. (834 aa)
F14O13.5Probable magnesium transporter NIPA1; Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). (335 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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