Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACL5 | BHLH32 | Q9S7X6 | Q9LS08 | Thermospermine synthase ACAULIS5; Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements. | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | 0.818 |
| ACL5 | LHW | Q9S7X6 | Q9XIN0 | Thermospermine synthase ACAULIS5; Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements. | Transcription factor LHW; Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. | 0.794 |
| ACL5 | LOG4 | Q9S7X6 | Q9LFH3 | Thermospermine synthase ACAULIS5; Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements. | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. | 0.407 |
| ACL5 | SAC51 | Q9S7X6 | Q9FMF4 | Thermospermine synthase ACAULIS5; Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements. | Transcription factor SAC51; Transcription factor. Involved in stem elongation, probably by regulating a subset of genes involved in this process. Belongs to the bHLH protein family. | 0.927 |
| ACL5 | SAMDC4 | Q9S7X6 | Q3E9D5 | Thermospermine synthase ACAULIS5; Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements. | S-adenosylmethionine decarboxylase 1 alpha chain; Essential for biosynthesis of the polyamines spermidine and spermine. Essential for polyamine homeostasis, and normal plant embryogenesis, growth and development. | 0.964 |
| BHLH32 | ACL5 | Q9LS08 | Q9S7X6 | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | Thermospermine synthase ACAULIS5; Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements. | 0.818 |
| BHLH32 | DOF2.1 | Q9LS08 | Q8LE43 | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | Dof zinc finger protein DOF2.1; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. | 0.746 |
| BHLH32 | LHW | Q9LS08 | Q9XIN0 | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | Transcription factor LHW; Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. | 0.988 |
| BHLH32 | LOG4 | Q9LS08 | Q9LFH3 | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. | 0.911 |
| BHLH32 | SAC51 | Q9LS08 | Q9FMF4 | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | Transcription factor SAC51; Transcription factor. Involved in stem elongation, probably by regulating a subset of genes involved in this process. Belongs to the bHLH protein family. | 0.789 |
| DOF2.1 | BHLH32 | Q8LE43 | Q9LS08 | Dof zinc finger protein DOF2.1; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | 0.746 |
| DOF2.1 | LHW | Q8LE43 | Q9XIN0 | Dof zinc finger protein DOF2.1; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. | Transcription factor LHW; Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. | 0.758 |
| DOF2.1 | LOG4 | Q8LE43 | Q9LFH3 | Dof zinc finger protein DOF2.1; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. | 0.740 |
| LHW | ACL5 | Q9XIN0 | Q9S7X6 | Transcription factor LHW; Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. | Thermospermine synthase ACAULIS5; Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements. | 0.794 |
| LHW | BHLH32 | Q9XIN0 | Q9LS08 | Transcription factor LHW; Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | 0.988 |
| LHW | DOF2.1 | Q9XIN0 | Q8LE43 | Transcription factor LHW; Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. | Dof zinc finger protein DOF2.1; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. | 0.758 |
| LHW | LOG4 | Q9XIN0 | Q9LFH3 | Transcription factor LHW; Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. | 0.917 |
| LHW | SAC51 | Q9XIN0 | Q9FMF4 | Transcription factor LHW; Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise. | Transcription factor SAC51; Transcription factor. Involved in stem elongation, probably by regulating a subset of genes involved in this process. Belongs to the bHLH protein family. | 0.898 |
| LOG4 | ACL5 | Q9LFH3 | Q9S7X6 | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. | Thermospermine synthase ACAULIS5; Required for correct xylem specification through regulation of the lifetime of the xylem elements. Prevents premature death of the xylem vessel elements. | 0.407 |
| LOG4 | BHLH32 | Q9LFH3 | Q9LS08 | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. | Transcription factor AIG1; Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. | 0.911 |
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