STRINGSTRING
B9DGX7_ARATH B9DGX7_ARATH T1B3.16 T1B3.16 K18G13.4 K18G13.4 T28J14.200 T28J14.200 DEK1 DEK1 ATML1 ATML1 EDR2L EDR2L PDF2 PDF2 Dl3290W Dl3290W HDG12 HDG12 F10M23.260 F10M23.260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B9DGX7_ARATHPleckstrin homology (PH) and lipid-binding START domains-containing protein. (733 aa)
T1B3.16Pleckstrin homology (PH) and lipid-binding START domains-containing protein. (737 aa)
K18G13.4Polyketide cyclase/dehydrase and lipid transport superfamily protein. (449 aa)
T28J14.200START (StAR-related lipid-transfer) lipid-binding domain-containing protein. (541 aa)
DEK1Calpain-type cysteine protease DEK1; Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active. Required for the formation of giant cells in sepals by determining cell fate and promoting endoreplication. (2151 aa)
ATML1Homeobox-leucine zipper protein MERISTEM L1; Probable transcription factor involved in cell specification and pattern formation during embryogenesis. Binds to the L1 box DNA sequence 5'-TAAATG[CT]A-3'. Plays a role in maintaining the identity of L1 cells, possibly by interacting with their L1 box or other target- gene promoters. Functionally redundant to PDF2. (762 aa)
EDR2LProtein ENHANCED DISEASE RESISTANCE 2-like; Binds to phosphatidylinositol-4-phosphate (PtdIns(4)P). May regulate the salicylic acid- (SA-) mediated resistance to pathogens (By similarity). (719 aa)
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2; Probable transcription factor that binds to the L1 box DNA sequence 5'-TAAATG[CT]A-3'. Plays a role in maintaining the identity of L1 cells, possibly by interacting with their L1 box or other target- gene promoters. Functionally redundant to ATML1. (743 aa)
Dl3290WPolyketide cyclase/dehydrase and lipid transport superfamily protein. (433 aa)
HDG12Homeobox-leucine zipper protein HDG12; Probable transcription factor that acts as negative regulator of trichome branching in association with HDG11. May regulate cell differentiation and proliferation during root and shoot meristem development. Acts as positive regulator of SCL18/LAS expression. (687 aa)
F10M23.260START (StAR-related lipid-transfer) lipid-binding domain-containing protein. (461 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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