STRINGSTRING
NLP8 NLP8 DOF3.4 DOF3.4 TGA4 TGA4 NLP7 NLP7 DOF5.4 DOF5.4 NLP6 NLP6 NRG2 NRG2 LBD37 LBD37 HRS1 HRS1 AFB3 AFB3 HHO1 HHO1 TCP20 TCP20 ANR1 ANR1 LBD39 LBD39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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NLP8Protein NLP8; Probable transcription factor. (947 aa)
DOF3.4Dof zinc finger protein DOF3.4; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements. (253 aa)
TGA4Transcription factor TGA4; Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'- TGACGTGG-3') another cis-acting element found in plant histone promoters. (364 aa)
NLP7Protein NLP7; Transcription factor involved in regulation of nitrate assimilation and in transduction of the nitrate signal. (959 aa)
DOF5.4Dof zinc finger protein DOF5.4; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements (By similarity). (307 aa)
NLP6Protein NLP6; Probable transcription factor. (841 aa)
NRG2Nitrate regulatory gene2 protein; Required for nitrate signaling. Regulates expression of the nitrate-responsive genes NIA1, NIR1, NRT2.1 and NPF6.3/NRT1.1. (796 aa)
LBD37LOB domain-containing protein 37. (250 aa)
HRS1Transcription factor HRS1; Transcription factor involved in nitrate and phosphate signaling in roots. Integrates nitrate and phosphate starvation responses and adaptation of root architecture depending on nutrient availabilities. Acts downstream of the nitrate sensor and transporter NPF6.3/NRT1.1. Represses primary root development in response to phosphate deficiency conditions, only when nitrate is present. Involved in the modulation of primary root and root hair growth in phosphate-deprived environement. May be required for suppressing abscisic acid (ABA) signaling in germinating emb [...] (344 aa)
AFB3Protein AUXIN SIGNALING F-BOX 3; Confers sensitivity to the virulent bacterial pathogen P.syringae (By similarity). Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Auxin receptor that mediates Aux/IAA proteins proteasomal degradation and auxin- regulated transcription. Involved in embryogenesis regulation by auxin. (577 aa)
HHO1Transcription factor HHO1; Probable factor involved in nitrate and phosphate signaling in roots. Integrates nitrate and phosphate starvation responses and adaptation of root architecture, depending on nutrient availabilities. Acts downstream of the nitrate sensor and transporter NPF6.3/NRT1.1. Represses primary root development in response to phosphate deficiency conditions, only when nitrate is present. (357 aa)
TCP20Transcription factor TCP20; Transcription factor that binds to the site II motif (3'- TGGGCC/T-5') in the promoter of PCNA-2 and to 3'-GCCCG/A-5' elements in the promoters of cyclin CYCB1-1 and ribosomal protein genes. (314 aa)
ANR1MADS-box transcription factor ANR1; Probable transcription factor. Required for root plasticity in response to nitrate, NO(3)(-). Promotes lateral root growth in a NRT1.1-dependent manner. (234 aa)
LBD39LOB domain-containing protein 39. (240 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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