(8 nodes) Mixed, incl. PWI domain superfamily, and Splicing factor, RBM39-like network (Arabidopsis thaliana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T6J4.10	Protein kinase superfamily protein. (834 aa)
	F9L1.14	Protein-protein interaction regulator family protein. (470 aa)
	F12A24.12	Splicing factor, CC1-like protein. (610 aa)
	SAP18	Histone deacetylase complex subunit SAP18; Links the histone deacetylase complex to transcriptional repressors bound to chromatin. Involved in the tethering of the SIN3 complex to core histone proteins. (152 aa)
	T19P19.70	SAP domain-containing protein. (633 aa)
	F16P2.41	Splicing factor PWI domain-containing protein. (878 aa)
	T13D8.9	Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein. (899 aa)
	RH34	DEAD-box ATP-dependent RNA helicase 34; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity). Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily. (392 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F12A24.12	F16P2.41	F4ILE1	Q8L7W3	Splicing factor, CC1-like protein.	Splicing factor PWI domain-containing protein.	0.927
F12A24.12	F9L1.14	F4ILE1	F4HZI8	Splicing factor, CC1-like protein.	Protein-protein interaction regulator family protein.	0.437
F12A24.12	SAP18	F4ILE1	O64644	Splicing factor, CC1-like protein.	Histone deacetylase complex subunit SAP18; Links the histone deacetylase complex to transcriptional repressors bound to chromatin. Involved in the tethering of the SIN3 complex to core histone proteins.	0.670
F12A24.12	T13D8.9	F4ILE1	Q8VY15	Splicing factor, CC1-like protein.	Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein.	0.912
F12A24.12	T19P19.70	F4ILE1	O65655	Splicing factor, CC1-like protein.	SAP domain-containing protein.	0.432
F12A24.12	T6J4.10	F4ILE1	A0A1P8ASP4	Splicing factor, CC1-like protein.	Protein kinase superfamily protein.	0.582
F16P2.41	F12A24.12	Q8L7W3	F4ILE1	Splicing factor PWI domain-containing protein.	Splicing factor, CC1-like protein.	0.927
F16P2.41	F9L1.14	Q8L7W3	F4HZI8	Splicing factor PWI domain-containing protein.	Protein-protein interaction regulator family protein.	0.944
F16P2.41	RH34	Q8L7W3	Q9C8J1	Splicing factor PWI domain-containing protein.	DEAD-box ATP-dependent RNA helicase 34; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity). Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily.	0.815
F16P2.41	SAP18	Q8L7W3	O64644	Splicing factor PWI domain-containing protein.	Histone deacetylase complex subunit SAP18; Links the histone deacetylase complex to transcriptional repressors bound to chromatin. Involved in the tethering of the SIN3 complex to core histone proteins.	0.890
F16P2.41	T13D8.9	Q8L7W3	Q8VY15	Splicing factor PWI domain-containing protein.	Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein.	0.995
F16P2.41	T19P19.70	Q8L7W3	O65655	Splicing factor PWI domain-containing protein.	SAP domain-containing protein.	0.916
F16P2.41	T6J4.10	Q8L7W3	A0A1P8ASP4	Splicing factor PWI domain-containing protein.	Protein kinase superfamily protein.	0.709
F9L1.14	F12A24.12	F4HZI8	F4ILE1	Protein-protein interaction regulator family protein.	Splicing factor, CC1-like protein.	0.437
F9L1.14	F16P2.41	F4HZI8	Q8L7W3	Protein-protein interaction regulator family protein.	Splicing factor PWI domain-containing protein.	0.944
F9L1.14	RH34	F4HZI8	Q9C8J1	Protein-protein interaction regulator family protein.	DEAD-box ATP-dependent RNA helicase 34; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity). Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily.	0.884
F9L1.14	SAP18	F4HZI8	O64644	Protein-protein interaction regulator family protein.	Histone deacetylase complex subunit SAP18; Links the histone deacetylase complex to transcriptional repressors bound to chromatin. Involved in the tethering of the SIN3 complex to core histone proteins.	0.994
F9L1.14	T13D8.9	F4HZI8	Q8VY15	Protein-protein interaction regulator family protein.	Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein.	0.802
F9L1.14	T19P19.70	F4HZI8	O65655	Protein-protein interaction regulator family protein.	SAP domain-containing protein.	0.995
F9L1.14	T6J4.10	F4HZI8	A0A1P8ASP4	Protein-protein interaction regulator family protein.	Protein kinase superfamily protein.	0.807