STRINGSTRING
MTG10.14 MTG10.14 PHE1 PHE1 T2P4.13 T2P4.13 DME DME FH5 FH5 SUVH7 SUVH7 HDG9 HDG9 HDG6 HDG6 MPC MPC T8O18.3 T8O18.3 HDG3 HDG3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MTG10.14Homeodomain-like superfamily protein. (566 aa)
PHE1MADS-box transcription factor PHERES 1; Probable transcription factor involved in the development of gametophytes and seeds. (279 aa)
T2P4.13Nucleotidyltransferase family protein. (502 aa)
DMETranscriptional activator DEMETER; Transcriptional activator involved in gene imprinting. Catalyzes the release of 5-methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism. Allows the expression of the maternal copy of the imprinted MEA gene before fertilization, possibly by antagonizing or suppressing DNA methylation on target promoter. Probably acts by nicking the MEA promoter. Required for stable reproducible patterns of floral and vegetative development. (1987 aa)
FH5Formin-like protein 5; Might be involved in the organization and polarity of the actin cytoskeleton. Interacts with the barbed end of actin filaments and nucleates actin-filament polymerization in vitro. Seems to play a role in cytokinesis. (900 aa)
SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7; Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (693 aa)
HDG9Homeobox-leucine zipper protein HDG9; Probable transcription factor that binds to the DNA sequence 5'-GCATTAAATGCGCA-3'. (718 aa)
HDG6Homeobox-leucine zipper protein HDG6; Probable transcription factor involved in the regulation of time of flowering through the photoperiod flowering pathway. May repress FT. (686 aa)
MPCMaternally expressed PAB C-terminal protein; Encodes almost entirely the C-terminal domain of poly(A)- binding proteins (PABPs). Plays a role in normal seed development and growth. (103 aa)
T8O18.3RmlC-like cupins superfamily protein. (356 aa)
HDG3Homeobox-leucine zipper protein HDG3; Probable transcription factor. (725 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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