STRINGSTRING
RPL15A RPL15A RPL13B RPL13B RPL8A RPL8A RPS23B RPS23B RPL32A RPL32A RPL5B RPL5B RPS2C RPS2C RPL7AA RPL7AA RPL17B RPL17B RPL26A RPL26A RPL18AB RPL18AB RPL27C RPL27C RPL31C RPL31C RPP0C RPP0C RPL10AC RPL10AC RPL7B RPL7B RPL8C RPL8C RPP0B RPP0B RPL8B RPL8B RPL27B RPL27B RPP1A RPP1A RPL10AA RPL10AA RPL10A RPL10A RPL10C RPL10C RPS7A RPS7A RPS3AA RPS3AA RPL26B RPL26B RPL34C RPL34C RPL30C RPL30C RPS9B RPS9B RPL7AB RPL7AB RPL23AB RPL23AB RPS16B RPS16B RPL22B RPL22B RPL4A RPL4A RPL31A RPL31A RPL19A RPL19A RPS20B RPS20B RPL9D RPL9D RPL14B RPL14B RPS5A RPS5A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPL15A60S ribosomal protein L15-1; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
RPL13B60S ribosomal protein L13-1. (206 aa)
RPL8A60S ribosomal protein L8-1. (258 aa)
RPS23B40S ribosomal protein S23-2; Belongs to the universal ribosomal protein uS12 family. (142 aa)
RPL32A60S ribosomal protein L32-1; Belongs to the eukaryotic ribosomal protein eL32 family. (133 aa)
RPL5B60S ribosomal protein L5-2; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throug [...] (301 aa)
RPS2C40S ribosomal protein S2-3; 40S ribosomal protein. Also involved in RNA-directed DNA methylation (RdDM). (285 aa)
RPL7AA60S ribosomal protein L7a-1; Belongs to the eukaryotic ribosomal protein eL8 family. (257 aa)
RPL17B60S ribosomal protein L17-2. (175 aa)
RPL26A60S ribosomal protein L26-1; Belongs to the universal ribosomal protein uL24 family. (146 aa)
RPL18AB60S ribosomal protein L18a-2; Belongs to the eukaryotic ribosomal protein eL20 family. (178 aa)
RPL27C60S ribosomal protein L27-3. (135 aa)
RPL31C60S ribosomal protein L31-3. (119 aa)
RPP0C60S acidic ribosomal protein P0-3; Ribosomal protein P0 is the functional equivalent of E.coli protein L10; Belongs to the universal ribosomal protein uL10 family. (323 aa)
RPL10AC60S ribosomal protein L10a-3. (217 aa)
RPL7B60S ribosomal protein L7-2. (242 aa)
RPL8C60S ribosomal protein L8-3; Belongs to the universal ribosomal protein uL2 family. (258 aa)
RPP0B60S acidic ribosomal protein P0-2; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (320 aa)
RPL8B60S ribosomal protein L8-2; Belongs to the universal ribosomal protein uL2 family. (260 aa)
RPL27B60S ribosomal protein L27-2; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
RPP1A60S acidic ribosomal protein P1-1; Plays an important role in the elongation step of protein synthesis. (112 aa)
RPL10AA60S ribosomal protein L10a-1. (216 aa)
RPL10A60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor. (220 aa)
RPL10C60S ribosomal protein L10-3. (221 aa)
RPS7A40S ribosomal protein S7-1; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
RPS3AA40S ribosomal protein S3a-1; Belongs to the eukaryotic ribosomal protein eS1 family. (262 aa)
RPL26B60S ribosomal protein L26-2; Belongs to the universal ribosomal protein uL24 family. (146 aa)
RPL34C60S ribosomal protein L34-3; Belongs to the eukaryotic ribosomal protein eL34 family. (120 aa)
RPL30C60S ribosomal protein L30-3; Belongs to the eukaryotic ribosomal protein eL30 family. (112 aa)
RPS9B40S ribosomal protein S9-1; Belongs to the universal ribosomal protein uS4 family. (198 aa)
RPL7AB60S ribosomal protein L7a-2; Belongs to the eukaryotic ribosomal protein eL8 family. (256 aa)
RPL23AB60S ribosomal protein L23a-2; Binds to a specific region on the 26S rRNA; Belongs to the universal ribosomal protein uL23 family. (154 aa)
RPS16B40S ribosomal protein S16-2; Belongs to the universal ribosomal protein uS9 family. (146 aa)
RPL22B60S ribosomal protein L22-2; Belongs to the eukaryotic ribosomal protein eL22 family. (124 aa)
RPL4A60S ribosomal protein L4-1. (406 aa)
RPL31A60S ribosomal protein L31-1; Belongs to the eukaryotic ribosomal protein eL31 family. (119 aa)
RPL19A60S ribosomal protein L19-1; Belongs to the eukaryotic ribosomal protein eL19 family. (214 aa)
RPS20B40S ribosomal protein S20-2; Belongs to the universal ribosomal protein uS10 family. (122 aa)
RPL9D60S ribosomal protein L9-2; Belongs to the universal ribosomal protein uL6 family. (194 aa)
RPL14B60S ribosomal protein L14-2; Belongs to the eukaryotic ribosomal protein eL14 family. (134 aa)
RPS5A40S ribosomal protein S5-1. (207 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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