(7 nodes) Mixed, incl. Ribosomal protein L29e, and Ribosomal protein L21e network (Arabidopsis thaliana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL38A	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (69 aa)
	RPL11A	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...] (182 aa)
	RPL39A	60S ribosomal protein L39-1; Belongs to the eukaryotic ribosomal protein eL39 family. (51 aa)
	RPL29B	60S ribosomal protein L29-2. (61 aa)
	RPL21E	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family. (164 aa)
	RPL32B	60S ribosomal protein L32-2; Belongs to the eukaryotic ribosomal protein eL32 family. (133 aa)
	RPL28C	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family. (143 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL11A	RPL21E	P42795	Q9FDZ9	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	0.997
RPL11A	RPL28C	P42795	Q9M0E2	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family.	0.996
RPL11A	RPL29B	P42795	Q84WM0	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	60S ribosomal protein L29-2.	0.994
RPL11A	RPL32B	P42795	Q9FHG2	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	60S ribosomal protein L32-2; Belongs to the eukaryotic ribosomal protein eL32 family.	0.993
RPL11A	RPL38A	P42795	O22860	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.997
RPL11A	RPL39A	P42795	P51424	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	60S ribosomal protein L39-1; Belongs to the eukaryotic ribosomal protein eL39 family.	0.991
RPL21E	RPL11A	Q9FDZ9	P42795	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	0.997
RPL21E	RPL28C	Q9FDZ9	Q9M0E2	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family.	0.998
RPL21E	RPL29B	Q9FDZ9	Q84WM0	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	60S ribosomal protein L29-2.	0.995
RPL21E	RPL32B	Q9FDZ9	Q9FHG2	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	60S ribosomal protein L32-2; Belongs to the eukaryotic ribosomal protein eL32 family.	0.996
RPL21E	RPL38A	Q9FDZ9	O22860	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.998
RPL21E	RPL39A	Q9FDZ9	P51424	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	60S ribosomal protein L39-1; Belongs to the eukaryotic ribosomal protein eL39 family.	0.995
RPL28C	RPL11A	Q9M0E2	P42795	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family.	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	0.996
RPL28C	RPL21E	Q9M0E2	Q9FDZ9	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family.	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	0.998
RPL28C	RPL29B	Q9M0E2	Q84WM0	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family.	60S ribosomal protein L29-2.	0.996
RPL28C	RPL32B	Q9M0E2	Q9FHG2	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family.	60S ribosomal protein L32-2; Belongs to the eukaryotic ribosomal protein eL32 family.	0.994
RPL28C	RPL38A	Q9M0E2	O22860	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family.	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.998
RPL28C	RPL39A	Q9M0E2	P51424	60S ribosomal protein L28-2; Belongs to the eukaryotic ribosomal protein eL28 family.	60S ribosomal protein L39-1; Belongs to the eukaryotic ribosomal protein eL39 family.	0.991
RPL29B	RPL11A	Q84WM0	P42795	60S ribosomal protein L29-2.	60S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...]	0.994
RPL29B	RPL21E	Q84WM0	Q9FDZ9	60S ribosomal protein L29-2.	60S ribosomal protein L21-2; Belongs to the eukaryotic ribosomal protein eL21 family.	0.995