18 items (Arabidopsis thaliana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Your Input:
	Q6NM71_ARATH	RNA-binding (RRM/RBD/RNP motifs) family protein. (257 aa)
	PRORP3	Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily. (576 aa)
	Q8GYR7_ARATH	Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (170 aa)
	T12C24.15	Pentatricopeptide repeat-containing protein At1g12620; Belongs to the PPR family. P subfamily. (621 aa)
	APUM23	Pumilio homolog 23; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs. (753 aa)
	EMB1687	Probable ribonuclease P/MRP protein subunit POP5; Essential protein required during embryogenesis. Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity). (151 aa)
	THG2	tRNA(His) guanylyltransferase 2; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. (537 aa)
	THG1	tRNA(His) guanylyltransferase 1; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. (567 aa)
	F4IC62_ARATH	Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (254 aa)
	PRORP2	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily. (528 aa)
	T7N22.8	Ribonuclease III family protein. (237 aa)
	PRORP1	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria. (572 aa)
	MVP7.3	Putative endonuclease or glycosyl hydrolase. (841 aa)
	MUF9.6	Antiporter/ drug transporter. (156 aa)
	XRN2	5'-3' exoribonuclease 2; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. Degrades miRNA-derived loops, excised during miRNA maturation in the nucleus. Involved in pre-rRNA processing. Involved in the primary exonucleolytic shortening of the 5' external transcribed spacer (5'ETS), required for endonucleolytic processing at site P by the U3 snoRNP complex. Involved with XRN3 in the 5'-end processing of 5.8S and 25S rRNAs. Contributes with XRN3 to polyadenylation-dependent nuclear RNA surveillance. Involved in the deg [...] (1012 aa)
	XRN3	5'-3' exoribonuclease 3; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. Degrades miRNA-derived loops, excised during miRNA maturation in the nucleus. Required for proper development. Involved in pre-rRNA processing. Involved with XRN2 in the 5'-end exonucleolytic processing of 5.8S and 25S rRNAs. Contributes with XRN2 to polyadenylation-dependent nuclear RNA surveillance. Involved in the degradation of aberrant polyadenylated pre-rRNA through 5'-end processing. (1020 aa)
	TOZ	Transducin family protein / WD-40 repeat family protein. (876 aa)
	RPF2	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial. (630 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APUM23	TOZ	Q9C552	Q9LFE2	Pumilio homolog 23; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.	Transducin family protein / WD-40 repeat family protein.	0.911
EMB1687	PRORP1	Q6AWV1	Q66GI4	Probable ribonuclease P/MRP protein subunit POP5; Essential protein required during embryogenesis. Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity).	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	0.900
EMB1687	PRORP2	Q6AWV1	Q680B9	Probable ribonuclease P/MRP protein subunit POP5; Essential protein required during embryogenesis. Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity).	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	0.900
EMB1687	PRORP3	Q6AWV1	F4JKB6	Probable ribonuclease P/MRP protein subunit POP5; Essential protein required during embryogenesis. Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity).	Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily.	0.900
PRORP1	EMB1687	Q66GI4	Q6AWV1	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	Probable ribonuclease P/MRP protein subunit POP5; Essential protein required during embryogenesis. Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity).	0.900
PRORP1	PRORP2	Q66GI4	Q680B9	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	0.910
PRORP1	PRORP3	Q66GI4	F4JKB6	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily.	0.912
PRORP1	THG1	Q66GI4	F4IRQ5	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	tRNA(His) guanylyltransferase 1; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.	0.792
PRORP1	THG2	Q66GI4	F4ISV6	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	tRNA(His) guanylyltransferase 2; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.	0.637
PRORP2	EMB1687	Q680B9	Q6AWV1	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	Probable ribonuclease P/MRP protein subunit POP5; Essential protein required during embryogenesis. Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity).	0.900
PRORP2	PRORP1	Q680B9	Q66GI4	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	0.910
PRORP2	PRORP3	Q680B9	F4JKB6	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily.	0.903
PRORP2	THG1	Q680B9	F4IRQ5	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	tRNA(His) guanylyltransferase 1; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.	0.406
PRORP2	THG2	Q680B9	F4ISV6	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	tRNA(His) guanylyltransferase 2; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.	0.410
PRORP3	EMB1687	F4JKB6	Q6AWV1	Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily.	Probable ribonuclease P/MRP protein subunit POP5; Essential protein required during embryogenesis. Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity).	0.900
PRORP3	PRORP1	F4JKB6	Q66GI4	Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily.	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	0.912
PRORP3	PRORP2	F4JKB6	Q680B9	Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily.	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	0.903
Q6NM71_ARATH	TOZ	Q6NM71	Q9LFE2	RNA-binding (RRM/RBD/RNP motifs) family protein.	Transducin family protein / WD-40 repeat family protein.	0.603
THG1	PRORP1	F4IRQ5	Q66GI4	tRNA(His) guanylyltransferase 1; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.	Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria.	0.792
THG1	PRORP2	F4IRQ5	Q680B9	tRNA(His) guanylyltransferase 1; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.	Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily.	0.406