STRINGSTRING
F17A22.21 F17A22.21 F3I6.14 F3I6.14 F7G19.8 F7G19.8 T18B16.160 T18B16.160 SWC4 SWC4 SEU SEU T5J17.220 T5J17.220 SRT1 SRT1 MNJ8.20 MNJ8.20 MJE4.6 MJE4.6 HOS15 HOS15 LUG LUG F17L21.5 F17L21.5 F2G14.160 F2G14.160 SNL2 SNL2 Q9LK19_ARATH Q9LK19_ARATH SNL1 SNL1 F14N23.13 F14N23.13 SNL5 SNL5 SNL6 SNL6 F5O8.36 F5O8.36 F17L21.4 F17L21.4 AN AN SNL3 SNL3 F3I6.15 F3I6.15 F3I6.18 F3I6.18 LUH LUH SAP18 SAP18 TPR4 TPR4 AL5 AL5 F20P5.23 F20P5.23 HSBP HSBP F21M11.33 F21M11.33 F24C7.4 F24C7.4 T12J13.15 T12J13.15 F4J0F5_ARATH F4J0F5_ARATH JAZ13 JAZ13 F3I6.13 F3I6.13 F7G19.9 F7G19.9 T7N22.1 T7N22.1 F17L21.6 F17L21.6 F17L21.32 F17L21.32 F3I6.16 F3I6.16 A0A1P8BFD5 A0A1P8BFD5 F2G14.150 F2G14.150 SNL4 SNL4 F17L21.3 F17L21.3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F17A22.21Arginine-glutamic acid dipeptide repeat protein. (805 aa)
F3I6.14Paired amphipathic helix (PAH2) superfamily protein. (155 aa)
F7G19.8Arginine-glutamic acid dipeptide repeat protein. (916 aa)
T18B16.160Uncharacterized zinc finger CCHC domain-containing protein At4g19190. (595 aa)
SWC4SWR1-complex protein 4; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. (441 aa)
SEUTranscriptional corepressor SEUSS; DNA-binding adapter subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and LEUNIG to repress AGAMOUS expression. In association with LUG, regulates petal shape through AGAMOUS-independent mechanisms. Controls cell division during petal development and enable the proper patterning of petal [...] (877 aa)
T5J17.220Signal transducer, putative (DUF3550/UPF0682). (599 aa)
SRT1NAD-dependent protein deacetylase SRT1; NAD-dependent protein deacetylase. Has deacetylase activity towards H3K9Ac. May have a function in the safeguard against genome instabiliy and DNA damage to ensure plant cell growth (By similarity). Belongs to the sirtuin family. Class IV subfamily. (473 aa)
MNJ8.20Chaperone DnaJ-domain superfamily protein. (431 aa)
MJE4.6Paired amphipathic helix (PAH2) superfamily protein. (155 aa)
HOS15WD40 repeat-containing protein HOS15; Acts as repressor of cold stress-regulated gene expression. Interacts specifically with and promotes deacetylation of histone H4. Plays a role in gene regulation for plant acclimation and tolerance to cold stress. (613 aa)
LUGTranscriptional corepressor LEUNIG; Transcription repressor subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and SEUSS to repress AGAMOUS expression. Also plays a role in ovule and pollen development. Implicated in embryo and floral development. Involved in post-synthesis cell wall modifications necessary for mucilage ext [...] (931 aa)
F17L21.5Paired amphipathic helix (PAH2) superfamily protein. (241 aa)
F2G14.160Paired amphipathic helix (PAH2) superfamily protein. (87 aa)
SNL2Paired amphipathic helix protein Sin3-like 2; Acts as a transcriptional repressor. Plays roles in regulating gene expression and genome stability (By similarity). (1367 aa)
Q9LK19_ARATHPaired amphipathic helix Sin3-like protein. (374 aa)
SNL1Paired amphipathic helix protein Sin3-like 1; Acts as a transcriptional repressor. An histone deacetylase (HDAC) activity is required for transcription repression. May play a role in telomere stability. (1372 aa)
F14N23.13Paired amphipathic helix Sin3-like protein. (77 aa)
SNL5Paired amphipathic helix protein Sin3-like 5; Acts as a transcriptional repressor. Plays roles in regulating gene expression and genome stability (By similarity). (1162 aa)
SNL6Paired amphipathic helix protein Sin3-like 6; Acts as a transcriptional repressor. Plays roles in regulating gene expression and genome stability (By similarity). (1173 aa)
F5O8.36Paired amphipathic helix (PAH2) superfamily protein. (241 aa)
F17L21.4Paired amphipathic helix (PAH2) superfamily protein. (137 aa)
ANC-terminal binding protein AN; Involved in controlling the equilibrium between tubular and stacked structures in the Golgi complex (By similarity). Required for cortical microtubules (MTs) arrangement that confers cell shape. Regulates the width of leaves by controlling the polar elongation of leaf cells. Involved in the regulation of trichome branching. Seems to not be able to regulate gene transcription. Regulates epidermal cell divisions and elongation in a non-cell-autonomous manner (regulated by subepidermal cells), but regulates epidermal cell polarity, shape, trichome branching [...] (636 aa)
SNL3Paired amphipathic helix protein Sin3-like 3; Acts as a transcriptional repressor. Interacts with ERF7 to repress genes in abscisic acid and drought stress responses. The heterodimer represses transcription by tethering SNL3 to DNA. (1330 aa)
F3I6.15Paired amphipathic helix repeat-containing protein. (744 aa)
F3I6.18Paired amphipathic helix (PAH2) superfamily protein. (252 aa)
LUHTranscriptional corepressor LEUNIG_HOMOLOG; Transcription repressor subunit of the SEU-SLK1 and SEU-SLK2 transcriptional corepressor of abiotic stress (e.g. salt and osmotic stress) response genes, by means of an epigenetic process involving histone modification (e.g. H3K9 and H3K14 acetylation), probably by recruiting HDAC, to facilitate the condensation of chromatin thus preventing transcription at the target genes. Can also act as a transcription activator. Implicated in embryo and floral development. Involved in post- synthesis cell wall modifications necessary for mucilage extrusi [...] (787 aa)
SAP18Histone deacetylase complex subunit SAP18; Links the histone deacetylase complex to transcriptional repressors bound to chromatin. Involved in the tethering of the SIN3 complex to core histone proteins. (152 aa)
TPR4Topless-related protein 4; Transcription corepressor of Zinc finger transcription factors GAF1/IDD2 and ENY/IDD1 in regulation of gibberellin homeostasis and signaling. (1135 aa)
AL5PHD finger protein ALFIN-LIKE 5; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes. (260 aa)
F20P5.23Paired amphipathic helix (PAH2) superfamily protein. (160 aa)
HSBPHeat shock factor-binding protein; Negative regulator of the heat shock (HS) response. Affects negatively HSFA1B DNA-binding capacity in vitro. Involved in acquired thermotolerance but not basal thermotolerance. Crucial for seed development, after fertilization and during embryogenesis. Belongs to the HSBP1 family. (86 aa)
F21M11.33Prefoldin chaperone subunit family protein. (391 aa)
F24C7.4RING/FYVE/PHD zinc finger superfamily protein. (1193 aa)
T12J13.15Signal transducer, putative (DUF3550/UPF0682). (607 aa)
F4J0F5_ARATHPaired amphipathic helix SIN3-like protein. (355 aa)
JAZ13Protein JAZ13; Non-TIFY functional repressor of jasmonate (JA)-mediated growth and defense responses. Intrinsically resistant to JA-induced turnover, probably due to the absence of the canonical degron that strongly interacts with COI1 in the presence of JA-Ile in the TIFY/JAZ proteins. (125 aa)
F3I6.13Paired amphipathic helix (PAH2) superfamily protein. (196 aa)
F7G19.9Arginine-glutamic acid dipeptide repeat protein. (911 aa)
T7N22.1Uncharacterized protein. (915 aa)
F17L21.6Paired amphipathic helix (PAH2) superfamily protein. (225 aa)
F17L21.32Paired amphipathic helix (PAH2) superfamily protein. (222 aa)
F3I6.16Paired amphipathic helix (PAH2) superfamily protein. (245 aa)
A0A1P8BFD5Paired amphipathic helix Sin3-like protein. (122 aa)
F2G14.150Paired amphipathic helix Sin3-like protein. (139 aa)
SNL4Paired amphipathic helix protein Sin3-like 4; Acts as a transcriptional repressor. Plays roles in regulating gene expression and genome stability (By similarity). (1326 aa)
F17L21.3Paired amphipathic helix (PAH2) superfamily protein. (186 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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