STRINGSTRING
ADAP ADAP F10M10.12-2 F10M10.12-2 ELIP2 ELIP2 AHK4 AHK4 AHK3 AHK3 AHK2 AHK2 ATE2 ATE2 PMI1 PMI1 RGL1 RGL1 PXMT1 PXMT1 UGT71C5 UGT71C5 NAC92 NAC92 NFYC4 NFYC4 ERDL6 ERDL6 SPT SPT RGL3 RGL3 TZF4 TZF4 NFYC3 NFYC3 ATE1-2 ATE1-2 DOF2.5 DOF2.5 PUB18 PUB18 MFT MFT GATA22 GATA22 SGT1B SGT1B VDAC3 VDAC3 AAE3 AAE3 ACBP1 ACBP1 RGA RGA F2I11_200 F2I11_200 AIP1 AIP1 GAI GAI Q9LT63_ARATH Q9LT63_ARATH BHLH34 BHLH34 MGL6.21 MGL6.21 ENY ENY PELPK1 PELPK1 T19L5.4 T19L5.4 ARP1-2 ARP1-2 DGAT1 DGAT1 LEP LEP F13E7.20 F13E7.20 PMEI5 PMEI5 ERD10 ERD10 HSP70-1 HSP70-1 PHYB PHYB BRIZ2 BRIZ2 PUB19 PUB19 CKA4 CKA4 DSEL DSEL UGT74F2 UGT74F2 SAUR36 SAUR36 PRT6 PRT6 BRIZ1 BRIZ1 ARIA ARIA INVC INVC MAX2 MAX2 RPN10 RPN10 ELIP1 ELIP1 SRK2I SRK2I CYS5 CYS5 ACO2 ACO2 MCT1 MCT1 GATA21 GATA21 F15M7.8 F15M7.8 MDC12.4 MDC12.4 LIP1-2 LIP1-2 GTE1 GTE1 RGL2 RGL2 UNE10 UNE10 PIF1 PIF1 HDA9 HDA9 NFYC9 NFYC9 TPK1-2 TPK1-2 TAP46 TAP46 ABI5 ABI5 ATML1 ATML1 FHY1-2 FHY1-2 PSRP2 PSRP2 F26K10.180 F26K10.180 PDF2 PDF2 TCP14 TCP14 EDL3 EDL3 GTS1 GTS1
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ADAPAP2-like ethylene-responsive transcription factor At1g16060; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). (345 aa)
F10M10.12-2Receptor protein kinase-like protein At4g34220; Belongs to the protein kinase superfamily. (757 aa)
ELIP2Early light-induced protein 2, chloroplastic; Probably involved in the integration of pigments into the mature light-harvesting pigment-protein complexes. Light-harvesting chlorophyll (LHC) a/b-binding protein required to ensure a high rate of chlorophyll accumulation during deetiolation in continuous high light. Involved in seed germination. May fulfill a photoprotective functions. Prevents excess accumulation of free chlorophyll by inhibiting the entire chlorophyll biosynthesis pathway (e.g. 5-aminolevulinate synthesis and Mg-protoporphyrin IX chelatase activity), and hence prevent p [...] (193 aa)
AHK4Histidine kinase 4; Cytokinins (CK) receptor related to bacterial two-component regulators. Binds also the synthetic urea-type cytokinin thiadiazuron, a potent defoliant and herbicide. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. In the presence of cytokinin, feeds phosphate to phosphorelay-integrating histidine phosphotransfer [...] (1080 aa)
AHK3Histidine kinase 3; Cytokinins (CK) receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP- dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. In the presence of cytokinin, feeds phosphate to phosphorelay-integrating histidine phosphotransfer protein (HPt) and activates subsequent cascade. Involved in meristems establishment in seedl [...] (1036 aa)
AHK2Histidine kinase 2; Cytokinins (CK) receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP- dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. In the presence of cytokinin, feeds phosphate to phosphorelay-integrating histidine phosphotransfer protein (HPt) and activates subsequent cascade. Involved in meristems establishment in seedl [...] (1176 aa)
ATE2Arginyl-tRNA--protein transferase 2; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Component of the N-end rule pathway with ATE1 and PRT6. The N-end rule pathway regulates seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. The end-rule pathway regulates various aspects of leaf and shoot development. Involved in the oxygen-dependent N-arginylation of RAP2-12, [...] (605 aa)
PMI1Protein PLASTID MOVEMENT IMPAIRED 1; Necessary for chloroplast and nuclear photorelocation movements via the regulation of chloroplast-actin (cp-actin) filaments in mesophyll cells, and together with PMIR1, in pavement cells. Required component for both the low- and high-light- dependent chloroplast movement responses via an abscisic acid (ABA) pathway. Involved in the ABA response pathway during seed germination. Modulates ABA accumulation during periods of water deficit at the seedling stage. (843 aa)
RGL1DELLA protein RGL1; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Has overlapping but distinct roles in GA signaling compared to RGA and GAI. Regulates the floral development. May also participate in seed germination and in ovule and anther development. Its activity is probably regulated by other phytohormones such as auxin and ethylene. (511 aa)
PXMT1Paraxanthine methyltransferase 1; Methyltransferase that may methylate 1,7-paraxanthine. Prevents seed germination and modulates root architecture during early seedlings development. Plays a minor role in defense responses toward pathogenic bacteria (e.g. P.syringae) ; Belongs to the methyltransferase superfamily. SABATH family. (353 aa)
UGT71C5UDP-glycosyltransferase 71C5; Possesses low quercetin 3-O-glucosyltransferase activity in vitro. (480 aa)
NAC92NAC domain-containing protein 92; Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5- 6n)[CT]AC[AG]-3'. Promotes lateral root development. Triggers the expression of senescence-associated genes during age-, salt- and dark-induced senescence through a regulatory network that may involve cross-talk with salt- and H(2)O(2)- dependent signaling pathways. Regulates also genes during seed germination. Regulates positively aging-induced cell death. Involved in age-related resistance (ARR) against Pseudomonas syringae pv. t [...] (285 aa)
NFYC4Nuclear transcription factor Y subunit C-4; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Involved in the abscisic acid (ABA) signaling pathway. (250 aa)
ERDL6Sugar transporter ERD6-like 6; Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (487 aa)
SPTTranscription factor SPATULA; Transcription factor that plays a role in floral organogenesis. Promotes the growth of carpel margins and of pollen tract tissues derived from them. (373 aa)
RGL3DELLA protein RGL3; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Its activity may be regulated by phytohormones such as auxin and ethylene (By similarity); Belongs to the GRAS family. DELLA subfamily. (523 aa)
TZF4Zinc finger CCCH domain-containing protein 2; Probable transcription repressor that functions as negative regulator of phytochrome-mediated promotion of seed germination. Inhibits seed germination by regulating the expression of gibberellic acid (GA) and abscisic acid (ABA) metabolic genes. Does not regulate the expression of the DELLA genes RGA and RGA1. Activated by PIL5, a phytochrome-interacting basic helix-loop-helix transcription factor. (393 aa)
NFYC3Nuclear transcription factor Y subunit C-3; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters; Belongs to the NFYC/HAP5 subunit family. (217 aa)
ATE1-2Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Component of the N-end rule pathway with ATE2 and PRT6. The N-end rule pathway regulates seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. The end-rule pathway regulates various aspects of leaf and shoot development. Involved in the oxygen-dependent N-arginylation of RAP2-12, [...] (632 aa)
DOF2.5Dof zinc finger protein DOF2.5; Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the activation of a component that would trigger germination as a consequence of red light perception. (369 aa)
PUB18U-box domain-containing protein 18; Functions as an E3 ubiquitin ligase (By similarity). Mediates EXO70B1 ubiquitination. Involved in the regulation of abscisic acid (ABA)-mediated stomatal movements. (697 aa)
MFTProtein MOTHER of FT and TFL1; May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity). Regulates seed germination via the abscisic acid (ABA) and gibberellic acid (GA)signaling pathways. During seed germination, MFT expression is directly repressed by ABI3 or promoted by ABI5 in the ABA signaling pathway. Involved in a negative feedback regulation of ABA signaling. Promotes embryo growth by direct repression of ABI5. In the GA signaling pathway, MFT expression is promoted by the DELLA protein RGL2 during seed germination. May regu [...] (173 aa)
GATA22Putative GATA transcription factor 22; Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Involved in the modulation of chloroplast development, growth and division in a cytokinin-dependent manner. Repressor of the gibberellic acid (GA) signaling pathway that regulates flowering and modulates greening, in a SOC1-dependent manner. Prevents the accumulation of SOC1 during flowering. Promotes chlorophyll biosynthesis throughout the plant, by regulating chlorophyll biosynthetic genes (e.g. HEMA1 and GUN4) and chloroplast localized glutam [...] (352 aa)
SGT1BProtein SGT1 homolog B; Involved in plant innate immunity. Is essential for resistance conferred by multiple R genes recognizing different oomycete pathogen isolates like avirulent H.parasitica (downy mildew). Contributes additively with RAR1 to RPP5-dependent resistance. Not required for RPM1, RPS2, RPS4 and RPS5-mediated resistance. Functions as negative regulator of RPS5 accumulation by assisting its degradation. May be involved in heat shock response by associating with HSC70-1 chaperone. Required for the SCF(TIR1)-mediated degradation of Aux/IAA proteins, but maybe not for SCF(TIR [...] (358 aa)
VDAC3Mitochondrial outer membrane protein porin 3; Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity); Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family. (274 aa)
AAE3Oxalate--CoA ligase; Oxalyl-CoA synthetase acting exclusively against oxalate. No activity with malonate, succinate, malate, acetate, formate, lactate, glycolate, glyoxylate or glutarate. Required for oxalate degradation, normal seed development and defense against oxalate-producing fungal pathogens. (514 aa)
ACBP1Acyl-CoA-binding domain-containing protein 1; Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with arachidonyl-CoA, barely with oleoyl-CoA, but not with palmitoyl-CoA. Confers tolerance and binds to lead ions Pb(2+), probably by promoting lead translocation from roots to shoots. May function as an intracellular carrier of acyl-CoA esters (By similarity). (338 aa)
RGADELLA protein RGA; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Positively regulates XERICO expression in seeds. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. Compared to other DELLA proteins, it is the most sensitive to GA application. No effect of the BOI proteins on its stability. Its activity is probably regulated by other phytohormones such as auxin and ethylene, attenu [...] (587 aa)
F2I11_200Pentatricopeptide repeat-containing protein At5g11310, mitochondrial. (602 aa)
AIP1Protein phosphatase 2C 3; Involved in the negative regulation of the K(+) potassium channel AKT1 by its dephosphorylation, antagonistically to CIPK proteins (e.g. CIPK23). Functions as positive regulator of abscisic acid-mediated cell signaling during seedling growth. Involved in the regulation of seed dormancy. Acts as negative regulator of seed dormancy by inhibiting abscisic signaling and subsequently activating gibberellic acid signaling ; Belongs to the PP2C family. (442 aa)
GAIDELLA protein GAI; Transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Transcription coactivator of the zinc finger transcription factors GAF1/IDD2 and ENY/IDD1 in regulation of gibberellin homeostasis and signaling. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Positively regulates XERICO expression. In contrast to RGA, it is less sensitive to GA. Its activity is probably regulated by other phytohormones such as auxin and ethylene [...] (533 aa)
Q9LT63_ARATHCysteine/Histidine-rich C1 domain family protein. (682 aa)
BHLH34Transcription factor bHLH34. (320 aa)
MGL6.21F-box/kelch-repeat protein At3g16740; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. (391 aa)
ENYZinc finger protein ENHYDROUS; Transcription factor promoting the transition to germination by regulating light and hormonal signaling during seed maturation. Acts as a positive regulator of phytochrome and/or gibberellin action. (500 aa)
PELPK1Protein PELPK1; Positive regulator of germination and plant growth. (370 aa)
T19L5.4GEM-like protein 5; Belongs to the GEM family. (272 aa)
ARP1-2Probable RNA-binding protein ARP1; Probable RNA-binding protein involved in the regulation of abscisic acid (ABA) response during seed germination. May regulate transcript levels of several germination-responsive genes under ABA. (261 aa)
DGAT1Diacylglycerol O-acyltransferase 1; Major contributor to triacylglycerol (TAG) synthesis and oil accumulation in seeds. Catalyzes the acylation of the sn-3 hydroxy group of sn-1,2-diacylglycerol using acyl-CoA. Can use palmitoyl-CoA and oleoyl-CoA as substrates. Can use oleoyl-CoA and linoleoyl-CoA as substrates. Has substrate preference for oleoyl-CoA compared to linoleoyl-CoA. Has complementary functions with PDAT1 that are essential for triacylglycerol synthesis and normal development of both seeds and pollen. (520 aa)
LEPEthylene-responsive transcription factor LEP; Cell division-promoting factor involved in leaf blade differentiation, inflorescence branching, as well as in carpel and silique shape. Promotes the number of xylem cells. Regulates positively the gibberellin signaling pathway leading to germination, hypocotyl elongation, and leaf expansion. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Be [...] (211 aa)
F13E7.20Zinc ion binding protein. (313 aa)
PMEI5Pectinesterase inhibitor 5; Pectin methylesterase (PME) inhibitor that targets PME from seeds and modulates PME activity and pectin methylesterification during seed germination. (179 aa)
ERD10Dehydrin ERD10. (260 aa)
HSP70-1Heat shock 70 kDa protein 1; In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable). Probably involved in defense response. Chaperone involved in protein targeting to chloroplasts. May cooperate with SGT1 and HSP90 in R gene-mediated resistance towards the oomycete Hyaloperonospora parasitica (downy mildew). Plays a role with WPP-domain proteins in facilitating WIT1 nuclear [...] (651 aa)
PHYBPhytochrome B; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenetic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reduct [...] (1172 aa)
BRIZ2BRAP2 RING ZnF UBP domain-containing protein 2; RING-type ubiquitin E3 ligase that binds ubiquitin and is required for seed germination and post-germination growth. (479 aa)
PUB19U-box domain-containing protein 19; Functions as an E3 ubiquitin ligase. (686 aa)
CKA4Casein kinase II subunit alpha-4, chloroplastic; Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site (By similarity). Involved in the regulation of various developmental processes. Involved in the regulation of plant growth and flowering time. Involved in retrograde signaling in plant responses to abscisic acid (ABA) and heat stress. May act as an enhancing factor in abiotic stress signaling through modulation of the expression of some molecular players in retrograde sig [...] (432 aa)
DSELPhospholipase A1-IIgamma; Acylhydrolase that catalyzes the hydrolysis of 1,3- diacylglycerol (1,3-DAG) and 1-monoacylglycerol (1-MAG) at the sn-1 position. High activity toward 1,3-DAG and 1-MAG, but low activity toward 1,2-diacylglycerol (1,2-DAG) and 1-lysophosphatidylcholine (1- LPC), and no activity toward phosphatidylcholine (PC), monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG), triacylglycerol (TAG) and 2-monoacylglycerol (2-MAG). May be involved in the negative regulation of seedling establishment by inhibiting the breakdown, beta-oxidation and mobilizatio [...] (419 aa)
UGT74F2UDP-glycosyltransferase 74F2; Glycosyltransferase that glucosylates benzoic acid and derivatives. Substrate preference is benzoic acid > salicylic acid (SA) > 3-hydroxybenzoic acid > 4-hydroxybenzoic acid. Catalyzes the formation of both SA 2-O-beta-D-glucoside (SAG) and SA glucose ester (SGE). Has high affinity for the tryptophan precursor anthranilate. Catalyzes the formation of anthranilate glucose ester. Is the major source of this activity in the plant. (449 aa)
SAUR36Auxin-responsive protein SAUR36; Acts a positive regulator of leaf senescence and may mediate auxin-induced leaf senescence. Plays a role in the regulation of seed germination by gibberellins and abscisic acid (ABA). Plays a role in the regulation of light-dependent hypocotyl elongation ; Belongs to the ARG7 family. (162 aa)
PRT6E3 ubiquitin-protein ligase PRT6; Ubiquitin protein ligase which is a component of the N-end rule pathway with arginine specificity, and functions with the arginyltransferases ATE1 and ATE2. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. Does not participate in degradation of proteins with N-terminal Phe or Leu. The N-end rule pathway regulates seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity [...] (2006 aa)
BRIZ1BRAP2 RING ZnF UBP domain-containing protein 1; RING-type ubiquitin E3 ligase required for seed germination and post-germination growth. (488 aa)
ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2; May act as a substrate-specific adapter of an E3 ubiquitin- protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Acts as a positive regulator of ABA response via the modulation of the transcriptional activity of ABF2, a transcription factor which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements. Negative regulator of seed germination and young seedling growth. (710 aa)
INVCAlkaline/neutral invertase C, mitochondrial; Mitochondrial invertase that cleaves sucrose into glucose and fructose and is involved in the regulation of aerial tissue development and floral transition. May be modulating hormone balance in relation to the radicle emergence; Belongs to the glycosyl hydrolase 100 family. (664 aa)
MAX2F-box protein MAX2; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Promotes the senescence. Is necessary for responses to strigolactones and karrikins. Contributes to the selective repression of axillary shoots and moderates the branching by regulating negatively the auxin transport in primary stems, in an AXR1-independent manner. Required for the progression of leaf senescence mediated by methyl jasmonate. Required at each node to suppress axillary bud growth. (693 aa)
RPN1026S proteasome non-ATPase regulatory subunit 4 homolog; Plays a role in maintaining the structural integrity of the 19S regulatory particle (RP), subcomplex of the 26S proteasome. Plays a major role in both the direct and indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a potential docking subunit for both ubiquitin receptors RAD23s and [...] (386 aa)
ELIP1Early light-induced protein 1, chloroplastic; Prevents excess accumulation of free chlorophyll by inhibiting the entire chlorophyll biosynthesis pathway (e.g. 5- aminolevulinate synthesis and Mg-protoporphyrin IX chelatase activity), and hence prevent photooxidative stress (By similarity). Probably involved in the integration of pigments into the mature light- harvesting pigment-protein complexes. Light-harvesting chlorophyll (LHC) a/b-binding protein required to ensure a high rate of chlorophyll accumulation during deetiolation in continuous high light. Involved in seed germination. M [...] (195 aa)
SRK2ISerine/threonine-protein kinase SRK2I; Together with SRK2D, key component and activator of the abscisic acid (ABA) signaling pathway that regulates numerous ABA responses, such as seed germination, Pro accumulation, root growth inhibition, dormancy and seedling growth, and, to a lesser extent, stomatal closure. (361 aa)
CYS5Cysteine proteinase inhibitor 5; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily. (122 aa)
ACO21-aminocyclopropane-1-carboxylate oxidase 2; Enzyme involved in the ethylene biosynthesis. Required to mediate the 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated reversion of the ABA-induced inhibition of seed germination via endosperm rupture. May promote stem elongation by maximizing the extensibility cells, possibly by activating ethylene biosynthesis, in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0). (320 aa)
MCT1MEI2 C-terminal RRM only like 1. (233 aa)
GATA21GATA transcription factor 21; Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Involved in the modulation of chloroplast development, growth and division in a cytokinin-dependent manner. Repressor of the gibberellic acid (GA) signaling pathway that represses flowering and modulates greening, in a SOC1-dependent manner. Prevents the accumulation of SOC1 during flowering. Promotes chlorophyll biosynthesis throughout the plant, by regulating chlorophyll biosynthetic genes (e.g. HEMA1 and GUN4) and chloroplast localized glutamate synth [...] (398 aa)
F15M7.8F-box protein At5g06550. (502 aa)
MDC12.42-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. (462 aa)
LIP1-2Triacylglycerol lipase 1; Triacylglycerol (TAG) lipase active on triolein, trioctanoin, tributyrin and 1,3-Diolein, but not on phospho- and galactolipids. May be involved but dispensable for TAG storage breakdown during seed germination. (393 aa)
GTE1Transcription factor GTE1; Transcription activator that plays a role in the promotion of seed germination by both negatively and positively regulating the abscisic acid (ABA) and phytochrome A (phyA) transduction pathways, respectively. (386 aa)
RGL2DELLA protein RGL2; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. Acts as a major GA-response repressor of seed germination, including seed thermoinhibition. Promotes the biosynthesis of abscisic acid (ABA), especially in seed coats to maintain seed dormancy. Delays flowering and adu [...] (547 aa)
UNE10Transcription factor UNE10; Required during the fertilization of ovules by pollen. (399 aa)
PIF1Transcription factor PIF1; Transcription activator. Regulates negatively chlorophyll biosynthesis and seed germination in the dark, and lightinduced degradation of PIF1 relieves this negative regulation to promote photomorphogenesis. Binds to the G-box motif (5'-CACGTG-3') found in many light-regulated promoters. Promotes the expression of SOM, and thus modulates responses to abscisic acid (ABA) and gibberellic acid (GA). (478 aa)
HDA9Histone deacetylase 9; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity); Belongs to the histone deacetylase family. HD type 1 subfamily. (426 aa)
NFYC9Nuclear transcription factor Y subunit C-9; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Interacts with REF6 to directly regulate SOC1 transcription in response to flowering signals from photoperiod and gibberellic acid pathways. (231 aa)
TPK1-2Two-pore potassium channel 1; Voltage-independent, large conductance and potassium- selective tonoplast ion channel. Regulated by cytoplasmic calcium and pH. Does not mediate slow-vacuolar (SV) ionic currents, but essential to establish VK currents. Has some permeability for Rb(+) and NH(4)(+), but none for Na(+), Cs(+) or Li(+). Involved in intracellular K(+) redistribution and/or K(+) retranslocation between different tissues. (363 aa)
TAP46PP2A regulatory subunit TAP46; Involved in the positive regulation of the TOR signaling pathway. Acts as a negative regulator of PP2A catalytic activity. Plays a positive role in the ABA-regulated inhibition of germination, probably throught its interaction with ABI5. Belongs to the IGBP1/TAP42 family. (405 aa)
ABI5Protein ABSCISIC ACID-INSENSITIVE 5; Participates in ABA-regulated gene expression during seed development and subsequent vegetative stage by acting as the major mediator of ABA repression of growth. Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 and Em6 genes promoters. Can also trans- activate its own promoter, suggesting that it is autoregulated. Plays a role in sugar-mediated senescence. Belongs to the bZIP family. ABI5 subfamily. (442 aa)
ATML1Homeobox-leucine zipper protein MERISTEM L1; Probable transcription factor involved in cell specification and pattern formation during embryogenesis. Binds to the L1 box DNA sequence 5'-TAAATG[CT]A-3'. Plays a role in maintaining the identity of L1 cells, possibly by interacting with their L1 box or other target- gene promoters. Functionally redundant to PDF2. (762 aa)
FHY1-2Protein FAR-RED ELONGATED HYPOCOTYL 1; Key regulator of far red / red (FR/R) spectrum-specific responses essential for the adaption to changing light conditions (e.g. de-etiolation), essentially by regulating PHYA shuttling from the cytoplasm to the nucleus and by directly regulating the expression of some target genes, depending on light conditions and phosphorylation status. Binds chromatin at target genes promoters, especially in FR light conditions. Can activate transcription of different genes, some being in a phytochrome A (PHYA)- dependent and other in a PHYA-independent manners [...] (202 aa)
PSRP230S ribosomal protein 2, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus. May have a role in the recruitment of stored chloroplast mRNAs for active protein synthesis (By similarity). Bind single strand DNA (ssDNA) and RNA in vitro. Exhibits RNA chaperone activity. Regulates negatively resistance responses to abiotic stresses during seed germination [...] (253 aa)
F26K10.180Formin-like protein (DUF1421). (496 aa)
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2; Probable transcription factor that binds to the L1 box DNA sequence 5'-TAAATG[CT]A-3'. Plays a role in maintaining the identity of L1 cells, possibly by interacting with their L1 box or other target- gene promoters. Functionally redundant to ATML1. (743 aa)
TCP14Transcription factor TCP14; Transcription factor involved the regulation of plant development. Together with TCP15, modulates plant stature by promoting cell division in young internodes. Represses cell proliferation in leaf and floral tissues. Together with TCP15, acts downstream of gibberellin (GA), and the stratification pathways that promote seed germination. Involved in the control of cell proliferation at the root apical meristem (RAM) by regulating the activity of CYCB1-1. Involved in the regulation of seed germination. May regulate the activation of embryonic growth potential d [...] (489 aa)
EDL3EID1-like F-box protein 3. (272 aa)
GTS1WD repeat-containing protein GTS1; Involved in the control of plant growth development. Acts as negative regulator of seed germination, cell division in meristematic regions, plant growth and overall biomass accumulation. May function by regulating ribosome activities and biogenesis in plant cells. (392 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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