17 items (Arabidopsis thaliana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T28D5.90	Proline-rich extensin-like family protein. (513 aa)
	F5O8.27	Proline-rich extensin-like family protein. (919 aa)
	EXT6	Proline-rich extensin-like family protein. (565 aa)
	F4J0B5_ARATH	Proline-rich extensin-like family protein. (1024 aa)
	F4JCZ1_ARATH	Proline-rich extensin-like family protein. (957 aa)
	F15M7.16	Proline-rich extensin-like family protein. (440 aa)
	EXT1	Extensin-1; Structural component which strengthens the primary cell wall; Belongs to the extensin family. (373 aa)
	F28B23.10	Proline-rich extensin-like family protein. (478 aa)
	F28B23.9	Proline-rich extensin-like family protein. (443 aa)
	EXT10	Proline-rich extensin-like family protein. (689 aa)
	EXT3	Extensin-3; Structural component which strengthens the primary cell wall. Forms dendritic structures indicating a propensity for self-assembly through tyrosine cross-linking. Forms intermolecular cross-links exclusively by pulcherosine (three Tyr). Scaffold formation requires an unobstructed C-terminus of EXT3. Required for the correct positioning of the cell plate during cytokinesis in cells of the developing embryo. Extensins contain a characteristic repeat of the pentapeptide Ser-Pro(4). For this particular extensin, a typical repeat of Ser-Pro(3) is found. (431 aa)
	EXT13	Proline-rich extensin-like family protein. (334 aa)
	EXT2	Extensin-2; Structural component which strengthens the primary cell wall. (743 aa)
	T28D5.100	Proline-rich extensin-like family protein. (707 aa)
	T28D5.60	Proline-rich extensin-like family protein. (350 aa)
	EXT12	Proline-rich extensin-like family protein. (429 aa)
	F14B2.9	Proline-rich extensin-like family protein. (212 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EXT1	EXT2	Q38913	Q9M1G9	Extensin-1; Structural component which strengthens the primary cell wall; Belongs to the extensin family.	Extensin-2; Structural component which strengthens the primary cell wall.	0.804
EXT1	F14B2.9	Q38913	Q9ZW80	Extensin-1; Structural component which strengthens the primary cell wall; Belongs to the extensin family.	Proline-rich extensin-like family protein.	0.408
EXT1	F15M7.16	Q38913	F4K3X4	Extensin-1; Structural component which strengthens the primary cell wall; Belongs to the extensin family.	Proline-rich extensin-like family protein.	0.802
EXT10	EXT12	Q9FG06	Q9T0L0	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.469
EXT10	EXT13	Q9FG06	Q9LHS1	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.893
EXT10	EXT2	Q9FG06	Q9M1G9	Proline-rich extensin-like family protein.	Extensin-2; Structural component which strengthens the primary cell wall.	0.953
EXT10	EXT3	Q9FG06	Q9FS16	Proline-rich extensin-like family protein.	Extensin-3; Structural component which strengthens the primary cell wall. Forms dendritic structures indicating a propensity for self-assembly through tyrosine cross-linking. Forms intermolecular cross-links exclusively by pulcherosine (three Tyr). Scaffold formation requires an unobstructed C-terminus of EXT3. Required for the correct positioning of the cell plate during cytokinesis in cells of the developing embryo. Extensins contain a characteristic repeat of the pentapeptide Ser-Pro(4). For this particular extensin, a typical repeat of Ser-Pro(3) is found.	0.571
EXT10	EXT6	Q9FG06	A0A1P8AYF2	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.901
EXT10	F15M7.16	Q9FG06	F4K3X4	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.900
EXT10	F4J0B5_ARATH	Q9FG06	F4J0B5	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.597
EXT10	F4JCZ1_ARATH	Q9FG06	F4JCZ1	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.902
EXT10	F5O8.27	Q9FG06	A0A1P8AM70	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.717
EXT10	T28D5.100	Q9FG06	Q9STM7	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.876
EXT10	T28D5.90	Q9FG06	Q9STM8	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.760
EXT12	EXT10	Q9T0L0	Q9FG06	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.469
EXT12	EXT13	Q9T0L0	Q9LHS1	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.508
EXT12	EXT6	Q9T0L0	A0A1P8AYF2	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.509
EXT12	F15M7.16	Q9T0L0	F4K3X4	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.451
EXT12	T28D5.100	Q9T0L0	Q9STM7	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.455
EXT13	EXT10	Q9LHS1	Q9FG06	Proline-rich extensin-like family protein.	Proline-rich extensin-like family protein.	0.893