(9 nodes) Ataxin-2, C-terminal network (Arabidopsis thaliana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CID9	Polyadenylate-binding protein-interacting protein 9. (327 aa)
	CID10	Polyadenylate-binding protein-interacting protein 10. (353 aa)
	CID12	Polyadenylate-binding protein-interacting protein 12; Binds nucleotic acids in vitro. (336 aa)
	CID11	Polyadenylate-binding protein-interacting protein 11. (358 aa)
	LARP6C	La-related protein 6C; Transcriptional regulator. (455 aa)
	CID13	Polyadenylate-binding protein-interacting protein 13. (320 aa)
	CID8	Polyadenylate-binding protein-interacting protein 8. (314 aa)
	CID4	Polyadenylate-binding protein-interacting protein 4. (595 aa)
	CID3	Polyadenylate-binding protein-interacting protein 3. (587 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CID10	CID3	Q9SG10	Q8L793	Polyadenylate-binding protein-interacting protein 10.	Polyadenylate-binding protein-interacting protein 3.	0.883
CID10	CID4	Q9SG10	Q94AM9	Polyadenylate-binding protein-interacting protein 10.	Polyadenylate-binding protein-interacting protein 4.	0.884
CID11	CID3	Q9LPI5	Q8L793	Polyadenylate-binding protein-interacting protein 11.	Polyadenylate-binding protein-interacting protein 3.	0.914
CID11	CID4	Q9LPI5	Q94AM9	Polyadenylate-binding protein-interacting protein 11.	Polyadenylate-binding protein-interacting protein 4.	0.913
CID12	CID3	Q9S7N9	Q8L793	Polyadenylate-binding protein-interacting protein 12; Binds nucleotic acids in vitro.	Polyadenylate-binding protein-interacting protein 3.	0.920
CID12	CID4	Q9S7N9	Q94AM9	Polyadenylate-binding protein-interacting protein 12; Binds nucleotic acids in vitro.	Polyadenylate-binding protein-interacting protein 4.	0.861
CID13	CID3	Q9FGE6	Q8L793	Polyadenylate-binding protein-interacting protein 13.	Polyadenylate-binding protein-interacting protein 3.	0.913
CID13	CID4	Q9FGE6	Q94AM9	Polyadenylate-binding protein-interacting protein 13.	Polyadenylate-binding protein-interacting protein 4.	0.913
CID3	CID10	Q8L793	Q9SG10	Polyadenylate-binding protein-interacting protein 3.	Polyadenylate-binding protein-interacting protein 10.	0.883
CID3	CID11	Q8L793	Q9LPI5	Polyadenylate-binding protein-interacting protein 3.	Polyadenylate-binding protein-interacting protein 11.	0.914
CID3	CID12	Q8L793	Q9S7N9	Polyadenylate-binding protein-interacting protein 3.	Polyadenylate-binding protein-interacting protein 12; Binds nucleotic acids in vitro.	0.920
CID3	CID13	Q8L793	Q9FGE6	Polyadenylate-binding protein-interacting protein 3.	Polyadenylate-binding protein-interacting protein 13.	0.913
CID3	CID8	Q8L793	Q9C8M0	Polyadenylate-binding protein-interacting protein 3.	Polyadenylate-binding protein-interacting protein 8.	0.861
CID3	CID9	Q8L793	Q9LRR6	Polyadenylate-binding protein-interacting protein 3.	Polyadenylate-binding protein-interacting protein 9.	0.842
CID4	CID10	Q94AM9	Q9SG10	Polyadenylate-binding protein-interacting protein 4.	Polyadenylate-binding protein-interacting protein 10.	0.884
CID4	CID11	Q94AM9	Q9LPI5	Polyadenylate-binding protein-interacting protein 4.	Polyadenylate-binding protein-interacting protein 11.	0.913
CID4	CID12	Q94AM9	Q9S7N9	Polyadenylate-binding protein-interacting protein 4.	Polyadenylate-binding protein-interacting protein 12; Binds nucleotic acids in vitro.	0.861
CID4	CID13	Q94AM9	Q9FGE6	Polyadenylate-binding protein-interacting protein 4.	Polyadenylate-binding protein-interacting protein 13.	0.913
CID4	CID8	Q94AM9	Q9C8M0	Polyadenylate-binding protein-interacting protein 4.	Polyadenylate-binding protein-interacting protein 8.	0.862
CID4	CID9	Q94AM9	Q9LRR6	Polyadenylate-binding protein-interacting protein 4.	Polyadenylate-binding protein-interacting protein 9.	0.843