STRINGSTRING
F11F8.39 F11F8.39 F17P19.17 F17P19.17 T21F11.17 T21F11.17 AP3M AP3M AP1M2 AP1M2 AP2M AP2M VAMP724 VAMP724 AAP19-2 AAP19-2 VAMP725 VAMP725 VAMP711 VAMP711 F6F22.18 F6F22.18 VAMP722 VAMP722 PHYL1.2 PHYL1.2 AP17 AP17 T15F16.12 T15F16.12 AAP19-1 AAP19-1 VAMP723 VAMP723 F18B3.140 F18B3.140 MUG13.13 MUG13.13 T7P1.11 T7P1.11 SEC22 SEC22 VAMP714 VAMP714 VAMP713 VAMP713 YKT62 YKT62 PHYL2.2 PHYL2.2 T1E22.40 T1E22.40 F17I23.60 F17I23.60 VAMP727 VAMP727 VAMP726 VAMP726 AP1M1 AP1M1 AP4M AP4M VAMP712 VAMP712 F5H14.10 F5H14.10 PHYL1.1 PHYL1.1 F11M15.2 F11M15.2 F9L1.32 F9L1.32 YKT61 YKT61 VAMP721 VAMP721
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
F11F8.39Coatomer subunit zeta-2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-disso [...] (179 aa)
F17P19.17SNARE-like superfamily protein; Belongs to the synaptobrevin family. (227 aa)
T21F11.17SNARE-like superfamily protein. (135 aa)
AP3MAP-3 complex subunit mu; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also functions in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles. Belongs to the adaptor complexes medium subunit family. (415 aa)
AP1M2AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. Required for KNOLLE localization at the cell plate to mediate cytokinesis. Functions redundantly with AP1M1 in multiple post-Golgi trafficking pathways leading from the TGN to the vacuole, the plasma membrane, and the cell- division plane. (428 aa)
AP2MAP-2 complex subunit mu; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. AP-2 recognizes Y-X-X-Phi endocytosis signal motif within th [...] (438 aa)
VAMP724Vesicle-associated membrane protein 724; Involved in the targeting and/or fusion of transport vesicles to their target membrane. (222 aa)
AAP19-2AP-1 complex subunit sigma-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity). (162 aa)
VAMP725Vesicle-associated membrane protein 725; Involved in the targeting and/or fusion of transport vesicles to their target membrane. (285 aa)
VAMP711Vesicle-associated membrane protein 711; Involved in the targeting and/or fusion of transport vesicles to their target membrane; Belongs to the synaptobrevin family. (219 aa)
F6F22.18AP-4 complex subunit sigma; Subunit of novel type of clathrin- or non-clathrin-associated protein coat involved in targeting proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. (143 aa)
VAMP722Vesicle-associated membrane protein 722; Involved in the targeting and/or fusion of transport vesicles to their target membrane; Belongs to the synaptobrevin family. (221 aa)
PHYL1.2Phytolongin Phyl1.2; Non-SNARE longin protein involved in membrane-trafficking machinery; Belongs to the synaptobrevin family. (255 aa)
AP17AP-2 complex subunit sigma; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The complex binds polyphosphoinositides (By similarity). (142 aa)
T15F16.12Coatomer subunit zeta-3; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-disso [...] (181 aa)
AAP19-1AP-1 complex subunit sigma-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity). (161 aa)
VAMP723Vesicle-associated membrane protein 723; Involved in the targeting and/or fusion of transport vesicles to their target membrane. (217 aa)
F18B3.140AP-3 complex subunit sigma; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles (By similarity); Belongs to the adaptor complexes small subunit family. (166 aa)
MUG13.13Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). (527 aa)
T7P1.11Coatomer subunit zeta-1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-disso [...] (177 aa)
SEC2225.3 kDa vesicle transport protein; V-SNARE involved in vesicle trafficking from the ER to the Golgi complex; Belongs to the synaptobrevin family. (218 aa)
VAMP714Vesicle-associated membrane protein 714; Involved in the targeting and/or fusion of transport vesicles to their target membrane. (221 aa)
VAMP713Vesicle-associated membrane protein 713; Involved in the targeting and/or fusion of transport vesicles to their target membrane. (221 aa)
YKT62VAMP-like protein YKT62; May be involved in the secretory pathway; Belongs to the synaptobrevin family. (199 aa)
PHYL2.2Phytolongin Phyl2.2; Non-SNARE longin protein involved in membrane-trafficking machinery; Belongs to the synaptobrevin family. (272 aa)
T1E22.40Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (141 aa)
F17I23.60Signal recognition particle receptor alpha subunit family protein. (634 aa)
VAMP727Vesicle-associated membrane protein 727; Involved in the targeting and/or fusion of transport vesicles to their target membrane; Belongs to the synaptobrevin family. (240 aa)
VAMP726Putative vesicle-associated membrane protein 726; Involved in the targeting and/or fusion of transport vesicles to their target membrane. (220 aa)
AP1M1AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. Functions redundantly with AP1M2 in multiple post-Golgi trafficking pathways leading from the TGN to the vacuole, the plasma membrane, and the cell-division plane. (428 aa)
AP4MAP-4 complex subunit mu; Subunit of novel type of clathrin- or non-clathrin-associated protein coat involved in targeting proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes medium subunit family. (451 aa)
VAMP712Vesicle-associated membrane protein 712; Involved in the targeting and/or fusion of transport vesicles to their target membrane; Belongs to the synaptobrevin family. (219 aa)
F5H14.10SNARE-like superfamily protein. (140 aa)
PHYL1.1Phytolongin Phyl1.1; Non-SNARE longin protein involved in membrane-trafficking machinery; Belongs to the synaptobrevin family. (254 aa)
F11M15.2Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (169 aa)
F9L1.32Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. Belongs to the adaptor complexes small subunit family. (147 aa)
YKT61VAMP-like protein YKT61; May be involved in the secretory pathway. (199 aa)
VAMP721Vesicle-associated membrane protein 721; Involved in the targeting and/or fusion of transport vesicles to their target membrane; Belongs to the synaptobrevin family. (219 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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