STRINGSTRING
DDI1 DDI1 A0A1P8ASU7 A0A1P8ASU7 T22D6.50 T22D6.50 SUMO8 SUMO8 RPL40A RPL40A T5E21.18 T5E21.18 UBQ13 UBQ13 T32F6.13 T32F6.13 PUX6 PUX6 F24P17.5 F24P17.5 F4C21.30 F4C21.30 PUX8 PUX8 T5K6.70 T5K6.70 F21J6.3 F21J6.3 T21H19.10 T21H19.10 RUB3 RUB3 F12F1.16 F12F1.16 T9J23.1 T9J23.1 T32F12.26 T32F12.26 T27E13.16 T27E13.16 UBQ4 UBQ4 UBQ11 UBQ11 PUX14 PUX14 PUX16 PUX16 SUMO1 SUMO1 RPS27AB RPS27AB RPS27AC RPS27AC RPS27AA RPS27AA BAG2 BAG2 BAG1 BAG1 UBQ3 UBQ3 UBQ8 UBQ8 UBQ12 UBQ12 UBQ14 UBQ14 SUMO7 SUMO7 RPL40B RPL40B PUX9 PUX9 NUB1 NUB1 F18B13.35 F18B13.35 TFCB TFCB TAF1B TAF1B PUX5 PUX5 RAD23D RAD23D RAD23C RAD23C RAD23A RAD23A RAD23B RAD23B UBP7 UBP7 SNRNP25 SNRNP25 TFCE TFCE MUB6 MUB6 F18G18.80 F18G18.80 UBQ10 UBQ10 K5J14.2 K5J14.2 TRP1 TRP1 MTI20.11 MTI20.11 MUB2 MUB2 ATG8A ATG8A TAF1 TAF1 RUB2 RUB2 PUX4 PUX4 BAG4 BAG4 T5E21.13 T5E21.13 ATG12A ATG12A ATG8H ATG8H ATG8E ATG8E ATG8C ATG8C ATG8F ATG8F MXH1.3 MXH1.3 SUMO5 SUMO5 T11G11 T11G11 PI4KG6 PI4KG6 UBP6 UBP6 Q94CL4_ARATH Q94CL4_ARATH PUX15 PUX15 PUX7 PUX7 PUX13 PUX13 PI4KG5 PI4KG5 TRP3 TRP3 CCP2 CCP2 UBL5 UBL5 UBQ9 UBQ9 SUMO4 SUMO4 SUMO6 SUMO6 MOJ9.5 MOJ9.5 SUMO3 SUMO3 SUMO2 SUMO2 MNF13.18 MNF13.18 PI4KG3 PI4KG3 T5E8.140 T5E8.140 PUX1 PUX1 ATG8I ATG8I MUB4 MUB4 PUX12 PUX12 ATG12B ATG12B F18O22.150 F18O22.150 NPL41 NPL41 BAG3 BAG3 ATG8G ATG8G PUX10 PUX10 C17L7.230 C17L7.230 C17L7.190 C17L7.190 C17L7.180 C17L7.180 C17L7.170 C17L7.170 C17L7.160 C17L7.160 C17L7.150 C17L7.150 T14D3.120 T14D3.120 TRP6 TRP6 MUB1 MUB1 UBP26 UBP26 PI4KG2 PI4KG2 MUB5 MUB5 RUB1 RUB1 PI4KG7 PI4KG7 DSK2B DSK2B DSK2A DSK2A ATG8D ATG8D TRP2 TRP2 UPL5 UPL5 PUX3 PUX3 ATG11 ATG11 F3I3.20 F3I3.20 MUB3 MUB3 F15I1.1 F15I1.1 F15I1.3 F15I1.3 F15I1.4 F15I1.4 F15I1.6 F15I1.6 ATG8B ATG8B PI4KG4 PI4KG4 F4C21.32 F4C21.32 7SL2 7SL2 7SL1 7SL1 PUX2 PUX2 T32F6.12 T32F6.12 PUX11 PUX11
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query proteins and first shell of interactors
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proteins of unknown 3D structure
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DDI1Protein DNA-DAMAGE INDUCIBLE 1; Receptor of ubiquitinated protein targeted to ubiquitin/proteasome-mediated proteolysis (UPP). Relatively weak affinity for both 'Lys-48'- and 'Lys-63'-linked ubiquitin chains with a slight preference for 'Lys-48-'linked chains of three or more ubiquitin units. (414 aa)
A0A1P8ASU7Ubiquitin-like superfamily protein. (261 aa)
T22D6.50UBQ, helicase-c and DEAD-like helicase domain-containing protein. (1175 aa)
SUMO8Putative small ubiquitin-related modifier 8; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity); Belongs to the ubiquitin family. SUMO subfamily. (97 aa)
RPL40AUbiquitin-60S ribosomal protein L40-1; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is inv [...] (128 aa)
T5E21.18SWAP (Suppressor-of-White-APricot)/surp domain-containing protein. (735 aa)
UBQ13Ubiquitin 13. (319 aa)
T32F6.13Ubiquitin-like superfamily protein. (242 aa)
PUX6Plant UBX domain-containing protein 6. (435 aa)
F24P17.5Ubiquitin family protein. (345 aa)
F4C21.30Ubiquitin family protein. (322 aa)
PUX8Plant UBX domain-containing protein 8. (564 aa)
T5K6.70Ubiquitin-like superfamily protein. (373 aa)
F21J6.3Ubiquitin-like superfamily protein. (642 aa)
T21H19.10RAD23 UV excision repair family protein. (171 aa)
RUB3NEDD8-like protein RUB3; May function as a stable post-translational protein modifier. (78 aa)
F12F1.16Ubiquitin-like superfamily protein. (99 aa)
T9J23.1NPL4-like protein 2; May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. (413 aa)
T32F12.26Ubiquitin family protein. (225 aa)
T27E13.16LRR repeats and ubiquitin-like domain-containing protein At2g30105. (374 aa)
UBQ4Polyubiquitin 4; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmi [...] (382 aa)
UBQ11Polyubiquitin 11; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasm [...] (229 aa)
PUX14Putative plant UBX domain-containing protein 14. (417 aa)
PUX16Plant UBX domain-containing protein 16. (415 aa)
SUMO1Small ubiquitin-related modifier 1; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Required for the massive protein sumoylation in the nucleus induced by heat shock and controlled by SIZ1. Involved in the regulation of the heat stress transcription factor HSFA2 in acquired thermotolerance. (100 aa)
RPS27ABUbiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is invol [...] (157 aa)
RPS27ACUbiquitin-40S ribosomal protein S27a-3; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is invol [...] (157 aa)
RPS27AAUbiquitin-40S ribosomal protein S27a-1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is invol [...] (156 aa)
BAG2BAG family molecular chaperone regulator 2; Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses. (285 aa)
BAG1BAG family molecular chaperone regulator 1; Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses. (342 aa)
UBQ3Polyubiquitin 3; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmi [...] (306 aa)
UBQ8Ubiquitin-related 1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endopl [...] (631 aa)
UBQ12Ubiquitin-related 1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endopl [...] (230 aa)
UBQ14Polyubiquitin 14; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasm [...] (305 aa)
SUMO7Putative small ubiquitin-related modifier 7; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity); Belongs to the ubiquitin family. SUMO subfamily. (95 aa)
RPL40BUbiquitin-60S ribosomal protein L40-2; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is inv [...] (128 aa)
PUX9Plant UBX domain-containing protein 9. (469 aa)
NUB1Ubiquitin-associated (UBA)/TS-N domain-containing protein. (562 aa)
F18B13.35Ubiquitin-like superfamily protein. (243 aa)
TFCBTubulin-folding cofactor B; Involved in control of cell division. Regulates probably the availability of alpha-tubulin for dimerization of alpha-/beta-tubulin, which is required for proper microtubule biogenesis. Decreased expression of TFCB results in enlarged mesophyll cells and leaf epidermal cells with bulged nuclei, increased ploidy and increased numbers of spindles and phragmoplasts. (243 aa)
TAF1BTranscription initiation factor TFIID subunit 1b; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Core scaffold of the TFIID complex. Acts as a histone acetyltransferase involved in the light regulation of growth and gene expression. Required for H3K9, H3K27, and H4K12 acetylation on the target promoters. (1786 aa)
PUX5Plant UBX domain-containing protein 5. (421 aa)
RAD23DUbiquitin receptor RAD23d; May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP) (By similarity); Belongs to the RAD23 family. (378 aa)
RAD23CUbiquitin receptor RAD23c; May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). (419 aa)
RAD23AProbable ubiquitin receptor RAD23a; May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP) (By similarity); Belongs to the RAD23 family. (368 aa)
RAD23BUbiquitin receptor RAD23b; May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP); Belongs to the RAD23 family. (371 aa)
UBP7Ubiquitin carboxyl-terminal hydrolase 7; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity). (477 aa)
SNRNP25U11/U12 small nuclear ribonucleoprotein 25 kDa protein. (165 aa)
TFCETubulin-folding cofactor E; Essential tubulin-folding protein involved in the tubulin folding pathway. Not essential for cell viability. Probably involved in the binding of alpha-tubulin in the multimeric supercomplex. (531 aa)
MUB6Membrane-anchored ubiquitin-fold protein 6; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (119 aa)
F18G18.80Ubiquitin-like superfamily protein. (208 aa)
UBQ10Polyubiquitin 10; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasm [...] (457 aa)
K5J14.2Ubiquitin-like superfamily protein. (879 aa)
TRP1Telomere repeat-binding protein 1; Binds specifically to the plant telomeric double-stranded DNA sequences 5'-GGTTTAG-3'. At least 4 repeats of telomeric sequences are required for binding. Induces DNA bending. (578 aa)
MTI20.11Ubiquitin-like superfamily protein. (95 aa)
MUB2Membrane-anchored ubiquitin-fold protein 2; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (124 aa)
ATG8AAutophagy-related protein 8a; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton. (122 aa)
TAF1Transcription initiation factor TFIID subunit 1; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Core scaffold of the TFIID complex (By similarity). Belongs to the TAF1 family. (1919 aa)
RUB2Ubiquitin-NEDD8-like protein RUB2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved i [...] (154 aa)
PUX4Plant UBX domain-containing protein 4. (303 aa)
BAG4BAG family molecular chaperone regulator 4; Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses. (269 aa)
T5E21.13Probable splicing factor 3A subunit 1. (785 aa)
ATG12AUbiquitin-like protein ATG12A; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. Conjugation with ATG5 through a ubiquitin-like conjugating system involving also ATG7 as an E1-like activating enzyme and ATG10 as an E2-like conjugating enzyme, is essential for its function. ATG12/ATG5 conjugate has an essential role in plant nutrient recycling; Belongs to the ATG12 family. (96 aa)
ATG8HAutophagy-related protein 8h; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (119 aa)
ATG8EAutophagy-related protein 8e; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton. (122 aa)
ATG8CAutophagy-related protein 8c; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (119 aa)
ATG8FAutophagy-related protein 8f; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton. (121 aa)
MXH1.3Zinc metalloproteinase-like protein. (603 aa)
SUMO5Small ubiquitin-related modifier 5; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity); Belongs to the ubiquitin family. SUMO subfamily. (108 aa)
T11G11Ubiquitin-like domain-containing CTD phosphatase; Dephosphorylates 26S nuclear proteasomes, thereby decreasing their proteolytic activity. The dephosphorylation may prevent assembly of the core and regulatory particles (CP and RP) into mature 26S proteasome (By similarity). (340 aa)
PI4KG6Phosphatidylinositol 4-kinase gamma 6; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3); Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily. (622 aa)
UBP6Ubiquitin carboxyl-terminal hydrolase 6; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins; Belongs to the peptidase C19 family. (482 aa)
Q94CL4_ARATHSWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein. (419 aa)
PUX15Putative plant UBX domain-containing protein 15. (359 aa)
PUX7Plant UBX domain-containing protein 7; Acts as a bridge between CDC48A and ubiquitin, suggesting a role in targeted protein degradation. (468 aa)
PUX13Plant UBX domain-containing protein 13. (525 aa)
PI4KG5Phosphatidylinositol 4-kinase gamma 5; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3). (630 aa)
TRP3Telomere repeat-binding protein 3; Binds specifically to the plant telomeric double-stranded DNA sequences. At least 2 repeats of telomeric sequences are required for binding. Induces DNA bending. (619 aa)
CCP2Ubiquitin-fold modifier 1; Ubiquitin-like modifier protein which binds to a number of as yet unidentified target proteins. (93 aa)
UBL5Ubiquitin-like protein 5. (73 aa)
UBQ9Ubiquitin-related 1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endopl [...] (322 aa)
SUMO4Putative small ubiquitin-related modifier 4; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity); Belongs to the ubiquitin family. SUMO subfamily. (114 aa)
SUMO6Putative small ubiquitin-related modifier 6; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity); Belongs to the ubiquitin family. SUMO subfamily. (117 aa)
MOJ9.5Ubiquitin-like superfamily protein. (66 aa)
SUMO3Small ubiquitin-related modifier 3; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity); Belongs to the ubiquitin family. SUMO subfamily. (111 aa)
SUMO2Small ubiquitin-related modifier 2; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Required for the massive protein sumoylation in the nucleus induced by heat shock and controlled by SIZ1. (103 aa)
MNF13.18Ubiquitin-like superfamily protein. (165 aa)
PI4KG3Phosphatidylinositol 4-kinase gamma 3; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3); Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily. (574 aa)
T5E8.140Ubiquitin family protein. (79 aa)
PUX1Plant UBX domain-containing protein 1; Regulates CDC48A by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer. (251 aa)
ATG8IAutophagy-related protein 8i; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton. (115 aa)
MUB4Membrane-anchored ubiquitin-fold protein 4; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (120 aa)
PUX12Plant UBX domain-containing protein 12. (152 aa)
ATG12BUbiquitin-like protein ATG12B; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. Conjugation with ATG5 through a ubiquitin-like conjugating system involving also ATG7 as an E1-like activating enzyme and ATG10 as an E2-like conjugating enzyme, is essential for its function. ATG12/ATG5 conjugate has an essential role in plant nutrient recycling; Belongs to the ATG12 family. (94 aa)
F18O22.150Ubiquitin-like superfamily protein. (163 aa)
NPL41NPL4-like protein 1; May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. Belongs to the NPL4 family. (413 aa)
BAG3BAG family molecular chaperone regulator 3; Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses. (303 aa)
ATG8GAutophagy-related protein 8g; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton. (121 aa)
PUX10Plant UBX domain-containing protein 10. (480 aa)
C17L7.230Ubiquitin-like superfamily protein. (415 aa)
C17L7.190Ubiquitin-like superfamily protein. (129 aa)
C17L7.180Ubiquitin-like superfamily protein. (259 aa)
C17L7.170Ubiquitin-like superfamily protein. (318 aa)
C17L7.160Ubiquitin-like superfamily protein. (197 aa)
C17L7.150Ubiquitin-like superfamily protein. (206 aa)
T14D3.120Ubiquitin-like superfamily protein. (73 aa)
TRP6Telomere repeat-binding protein 6; Binds specifically to the plant telomeric double-stranded DNA sequences. At least 4 repeats of telomeric sequences are required for binding. (400 aa)
MUB1Membrane-anchored ubiquitin-fold protein 1; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (117 aa)
UBP26Ubiquitin carboxyl-terminal hydrolase 26; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Deubiquitinates H2BK143ub1 of histone H2B; Belongs to the peptidase C19 family. (1067 aa)
PI4KG2Phosphatidylinositol 4-kinase gamma 2; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3); Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily. (550 aa)
MUB5Membrane-anchored ubiquitin-fold protein 5; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (120 aa)
RUB1Ubiquitin-NEDD8-like protein RUB1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved i [...] (156 aa)
PI4KG7Phosphatidylinositol 4-kinase gamma 7; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3) (By similarity). Undergoes autophosphorylation and phosphorylates serine/threonine residues of protein substrates. (650 aa)
DSK2BUbiquitin domain-containing protein DSK2b; Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). (551 aa)
DSK2AUbiquitin domain-containing protein DSK2a; Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). (538 aa)
ATG8DAutophagy-related protein 8d; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family. (120 aa)
TRP2Telomere repeat-binding protein 2; Binds specifically to the plant telomeric double-stranded DNA sequences. At least 2 repeats of telomeric sequences are required for binding. Induces DNA bending. (553 aa)
UPL5E3 ubiquitin-protein ligase UPL5; E3 ubiquitin protein ligase that regulates leaf senescence through ubiquitination and subsequent degradation of WRKY53. (873 aa)
PUX3Plant UBX domain-containing protein 3. (302 aa)
ATG11Autophagy-related protein 11; Accessory protein involved in autophagy. Acts as scaffold protein of the ATG1-ATG13 complex for faithful delivery of autophagic vesicles to the vacuole. Involved in the stress-induced phosphorylation of ATG1A for turnover of ATG1-ATG13 complex and proper ATG1-ATG13 complex assembly or activity. Required for selective mitophagy. Required for senescence-induced breakdown of mitochondria-resident proteins and mitochondrial vesicles. Seems not essential for ATG8- mediated autophagy; Belongs to the ATG11 family. (1148 aa)
F3I3.20Ubiquitin-like superfamily protein. (415 aa)
MUB3Membrane-anchored ubiquitin-fold protein 3; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (118 aa)
F15I1.1Ubiquitin-like superfamily protein. (158 aa)
F15I1.3Polyubiquitin-like protein. (121 aa)
F15I1.4Ubiquitin-40S ribosomal S27a-like protein. (144 aa)
F15I1.6Ubiquitin-like superfamily protein. (91 aa)
ATG8BAutophagy-related protein 8b; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton. (122 aa)
PI4KG4Phosphatidylinositol 4-kinase gamma 4; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3) (By similarity). Undergoes autophosphorylation and phosphorylates serine/threonine residues of protein substrates. Phosphorylates RPN10 and UFD1 in vitro. (566 aa)
F4C21.32Putative ubiquitin-like protein. (295 aa)
7SL2Ubiquitin domain-containing protein 7SL RNA2; Controls phase transition from the vegetative to the reproductive state. Involved in the maintenance of the shoot apical meristem (SAM) thus preventing inflorescence meristem (IM) formation and subsequent inflorescence stem development during flowering. Regulates leaf and organ morphology; Belongs to the ubiquitin family. (263 aa)
7SL1Ubiquitin domain-containing protein 7SL RNA1. (275 aa)
PUX2Plant UBX domain-containing protein 2; Facilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function. Appears to act as a negative regulator mediating the powdery mildew-plant interaction. (458 aa)
T32F6.12Ubiquitin-like superfamily protein. (175 aa)
PUX11Plant UBX domain-containing protein 11. (531 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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