STRINGSTRING
T26B15.19 T26B15.19 EMB2654 EMB2654 F9G14_140 F9G14_140 P67 P67 T17A5.11 T17A5.11 T4B21.17 T4B21.17 PRORP2 PRORP2 PRORP1 PRORP1 PPR4 PPR4 T12C14_240 T12C14_240 T27F4.19 T27F4.19 PRORP3 PRORP3 EMB976 EMB976 MRL1 MRL1 EMB1270 EMB1270 F9L1.43 F9L1.43 PGR3 PGR3 EMB3131 EMB3131 MZB10.9 MZB10.9 LPE1 LPE1 EMB2217 EMB2217 F23A5.24 F23A5.24 T12C14_170 T12C14_170 MWJ3.2 MWJ3.2 T9L3_120 T9L3_120 MKD10.5 MKD10.5 F18O14.27 F18O14.27
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T26B15.19Pentatricopeptide repeat-containing protein At2g32630; Belongs to the PPR family. P subfamily. (624 aa)
EMB2654Pentatricopeptide repeat-containing protein At2g41720. (822 aa)
F9G14_140Pentatricopeptide repeat-containing protein At5g02830, chloroplastic. (852 aa)
P67Pentatricopeptide repeat-containing protein At4g16390, chloroplastic; Involved in chloroplast RNA processing. Can bind RNA. Involved in chloroplast development. Involved in chloroplast ribosomal RNA (rRNA) processing and/or translation. Required for FtsH-mediated chloroplast biogenesis. Involved in translation and accumulation of chloroplast ATP synthase subunits. Belongs to the PPR family. P subfamily. (702 aa)
T17A5.11Pentatricopeptide repeat-containing protein At2g17670. (463 aa)
T4B21.17Pentatricopeptide repeat-containing protein At4g04790, mitochondrial. (821 aa)
PRORP2Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily. (528 aa)
PRORP1Proteinaceous RNase P 1, chloroplastic/mitochondrial; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially cleaves at the unusual cleavage site, but also able to cleave at the classical cleavage site. Also involved in the maturation of mRNAs in mitochondria. (572 aa)
PPR4Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; May play a role in the plastid ribosome biogenesis. Belongs to the PPR family. P subfamily. (952 aa)
T12C14_240Pentatricopeptide repeat-containing protein At3g62540, mitochondrial. (599 aa)
T27F4.19Pentatricopeptide repeat-containing protein At1g66345, mitochondrial. (544 aa)
PRORP3Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily. (576 aa)
EMB976Pentatricopeptide repeat-containing protein At5g27270; Belongs to the PPR family. P subfamily. (1038 aa)
MRL1Pentatricopeptide repeat-containing protein MRL1, chloroplastic; Regulator of the large subunit (LS) of RuBisCO. Involved either in the processing or in the stabilization of the processed transcript, probably by acting as a barrier to the 5'>3' degradation. Belongs to the PPR family. P subfamily. (1089 aa)
EMB1270Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; May play a role in embryogenesis. Belongs to the PPR family. P subfamily. (1440 aa)
F9L1.43Pentatricopeptide repeat-containing protein At1g15480, mitochondrial. (594 aa)
PGR3Pentatricopeptide repeat-containing protein At4g31850, chloroplastic; Plays a role in the stabilization of the primary polycistronic transcript of the petL operon encoding subunits of the cytochrome b6-f complex; Belongs to the PPR family. P subfamily. (1112 aa)
EMB3131Pentatricopeptide repeat-containing protein At4g20740; Belongs to the PPR family. P subfamily. (727 aa)
MZB10.9Pentatricopeptide repeat-containing protein At3g09060; Belongs to the PPR family. P subfamily. (687 aa)
LPE1Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic; Required for light-regulated photosystem II (PSII) biogenesis and grana thylakoids formation by binding to the 5' UTR of PSII subunit mRNAs (e.g. psbJ, psbN and psbA) in a light-dependent manner through a redox-based mechanism, and facilitating the association of HCF173 with target mRNAs, which encodes PSII reaction center proteins (e.g. J, N and D1), thus regulating its expression by modulating ribosome loading. Belongs to the PPR family. P subfamily. (665 aa)
EMB2217Pentatricopeptide repeat-containing protein At1g79490, mitochondrial. (836 aa)
F23A5.24Pentatricopeptide repeat-containing protein At1g80880, mitochondrial. (540 aa)
T12C14_170Pentatricopeptide repeat-containing protein At3g62470, mitochondrial. (599 aa)
MWJ3.2Pentatricopeptide repeat-containing protein At5g55840; Belongs to the PPR family. P subfamily. (1096 aa)
T9L3_120Pentatricopeptide repeat-containing protein At5g14820, mitochondrial. (598 aa)
MKD10.5Pentatricopeptide repeat-containing protein At5g38730; Belongs to the PPR family. P subfamily. (596 aa)
F18O14.27Pentatricopeptide repeat-containing protein At1g19525; Belongs to the PPR family. P subfamily. (316 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.