STRINGSTRING
RAV1 RAV1 NGA2 NGA2 NGA3 NGA3 NGA4 NGA4 NGA1 NGA1 RAV2 RAV2 ABI3 ABI3 LEC2 LEC2 ARF31 ARF31 ARF32 ARF32 F23H24.5 F23H24.5 TEM1 TEM1 F17J6.20 F17J6.20 DPA4 DPA4 ARF14-2 ARF14-2 FUS3 FUS3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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RAV1AP2/ERF and B3 domain-containing transcription factor RAV1; Binds specifically to bipartite recognition sequences composed of two unrelated motifs, 5'-CAACA-3' and 5'-CACCTG-3'. May function as negative regulator of plant growth and development. Belongs to the AP2/ERF transcription factor family. RAV subfamily. (344 aa)
NGA2B3 domain-containing transcription factor NGA2; Regulates lateral organ growth. Functionally redundant with NGA1, NGA3 and NGA4. (299 aa)
NGA3B3 domain-containing transcription factor NGA3; Regulates lateral organ growth. Functionally redundant with NGA1, NGA2 and NGA4. (358 aa)
NGA4B3 domain-containing transcription factor NGA4; Regulates lateral organ growth. Functionally redundant with NGA1, NGA2 and NGA3. (333 aa)
NGA1B3 domain-containing transcription factor NGA1; Regulates lateral organ growth. Functionally redundant with NGA2, NGA3 and NGA4. (310 aa)
RAV2AP2/ERF and B3 domain-containing transcription repressor RAV2; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Transcriptional repressor of flowering time on long day plants. Acts directly on FT expression by binding 5'-CAACA-3' and 5'-CACCTG-3 sequences (Probable). Functionally redundant with TEM1. (352 aa)
ABI3B3 domain-containing transcription factor ABI3; Participates in abscisic acid-regulated gene expression during seed development. Regulates the transcription of SGR1 and SGR2 that are involved in leaf and embryo degreening. (720 aa)
LEC2B3 domain-containing transcription factor LEC2; Transcription regulator that plays a central role in embryo development. Required for the maintenance of suspensor morphology, specification of cotyledon identity, progression through the maturation phase and suppression of premature germination. Ectopic expression is sufficient to promote somatic embryogenesis. (363 aa)
ARF31B3 domain-containing protein At2g36080. (244 aa)
ARF32B3 domain-containing protein At3g11580. (267 aa)
F23H24.5AP2/ERF and B3 domain-containing transcription factor At1g51120; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. RAV subfamily. (352 aa)
TEM1AP2/ERF and B3 domain-containing transcription repressor TEM1; Transcriptional repressor of flowering time on long day plants. Acts directly on FT expression by binding 5'-CAACA-3' and 5'- CACCTG-3 sequences. Functionally redundant with TEM2. Belongs to the AP2/ERF transcription factor family. RAV subfamily. (361 aa)
F17J6.20AP2/ERF and B3 domain-containing transcription factor At1g50680; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. RAV subfamily. (337 aa)
DPA4B3 domain-containing protein At5g06250. (282 aa)
ARF14-2AP2/ERF and B3 domain-containing transcription factor ARF14; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. RAV subfamily. (333 aa)
FUS3B3 domain-containing transcription factor FUS3; Transcription regulator involved in gene regulation during late embryogenesis. Its expression to the epidermis is sufficient to control foliar organ identity by regulating positively the synthesis abscisic acid (ABA) and negatively gibberellin production. Negatively regulates TTG1 in the embryo. Positively regulates the abundance of the ABI3 protein in the seed. Cooperates with KIN10 to regulate developmental phase transitions and lateral organ development and act both as positive regulators of abscisic acid (ABA) signaling during germination. (313 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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