STRINGSTRING
RBCS-3B RBCS-3B TIM TIM CP12-2 CP12-2 GAPA2 GAPA2 PGK1 PGK1 CP12-3 CP12-3 F14G9.19 F14G9.19 SBPASE SBPASE GAPB GAPB GAPA1 GAPA1 CFBP1 CFBP1 PRK PRK RBCS-2B RBCS-2B RBCS-1B RBCS-1B RBCS-1A RBCS-1A CP12-1 CP12-1 rbcL rbcL
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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Your Input:
RBCS-3BRibulose bisphosphate carboxylase small chain 3B, chloroplastic; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity). (181 aa)
TIMTriosephosphate isomerase, chloroplastic; Belongs to the triosephosphate isomerase family. (315 aa)
CP12-2Calvin cycle protein CP12-2, chloroplastic; Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. Coordinates the reversible inactivation of chloroplast enzymes GAPDH and PRK during darkness in photosynthetic tissues. Belongs to the CP12 family. (131 aa)
GAPA2Glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic; Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3- diphosphoglycerate by NADPH (By similarity). (399 aa)
PGK1Phosphoglycerate kinase 1, chloroplastic; Belongs to the phosphoglycerate kinase family. (481 aa)
CP12-3Calvin cycle protein CP12-3, chloroplastic; Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. Coordinates the reversible inactivation of chloroplast enzymes GAPDH and PRK during darkness in photosynthetic tissues. (134 aa)
F14G9.19Phosphoglycerate kinase 2, chloroplastic. (478 aa)
SBPASESedoheptulose-1,7-bisphosphatase, chloroplastic; Belongs to the FBPase class 1 family. (393 aa)
GAPBGlyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic; Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3- diphosphoglycerate by NADPH (By similarity); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (447 aa)
GAPA1Glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic; Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3- diphosphoglycerate by NADPH (By similarity). (396 aa)
CFBP1Fructose-1,6-bisphosphatase 1, chloroplastic; Catalyzes the irreversible reaction from fructose-1,6- bisphosphate to fructose-6-phosphate and inorganic phosphate, to regenerate the primary CO(2) acceptor molecule, ribulose-1,5- bisphosphate (Probable). Involved in the regulation of photosynthetic electron flow and sucrose synthesis. Its activity is critical for normal plant development and important for the regulation of a wide range of metabolic processes. (417 aa)
PRKPhosphoribulokinase, chloroplastic; Belongs to the phosphoribulokinase family. (395 aa)
RBCS-2BRibulose bisphosphate carboxylase small chain 2B, chloroplastic; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. (181 aa)
RBCS-1BRibulose bisphosphate carboxylase small chain 1B, chloroplastic; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. (181 aa)
RBCS-1ARibulose bisphosphate carboxylase small chain 1A, chloroplastic; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity). (180 aa)
CP12-1Calvin cycle protein CP12-1, chloroplastic; Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. Coordinates the reversible inactivation of chloroplast enzymes GAPDH and PRK during darkness in photosynthetic tissues. (124 aa)
rbcLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (479 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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