STRINGSTRING
MQK4.18 MQK4.18 CAN2 CAN2 T7B11.13 T7B11.13 CAN1 CAN1 SHOC1 SHOC1 F18E5.200 F18E5.200 T27I1.12 T27I1.12 ISI1 ISI1 RGTB1 RGTB1 RFS1 RFS1 SHH2 SHH2 RFS6 RFS6 RGTA1 RGTA1 RFS2 RFS2 NDL2 NDL2 K24C1.7 K24C1.7 RGTA2 RGTA2 NDL1 NDL1 RFS5 RFS5 RGTB2 RGTB2 Q9LK96_ARATH Q9LK96_ARATH T5P19_110 T5P19_110 F13E7.29 F13E7.29 T16L4.30 T16L4.30 CEQORH CEQORH F8K7.10 F8K7.10 F8K7.9 F8K7.9 AOR AOR NDL3 NDL3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MQK4.18Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity). (166 aa)
CAN2Staphylococcal-like nuclease CAN2; Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond. Possesses activity toward the single-stranded DNA, double-stranded DNA and RNA. May be involved in genomic DNA degradation during programmed cell death. (332 aa)
T7B11.13TolB protein-like protein. (701 aa)
CAN1Staphylococcal-like nuclease CAN1; Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond. Possesses activity toward the single-stranded DNA, double-stranded DNA and RNA. May be involved in genomic DNA degradation during programmed cell death. (323 aa)
SHOC1Protein SHORTAGE IN CHIASMATA 1; Essential for the formation of class I meiotic crossovers. (1594 aa)
F18E5.200Oxidoreductase, zinc-binding dehydrogenase family protein. (325 aa)
T27I1.12Protein prenylyltransferase superfamily protein. (420 aa)
ISI1Impaired sucrose induction 1. (305 aa)
RGTB1Geranylgeranyl transferase type-2 subunit beta 1; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2. Involved in the geranylgeranylation of RABA2A. In vitro, can prenylate PGGTI targets with the C-terminal sequence Cys-aliphatic- aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C-terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the beta subuni [...] (321 aa)
RFS1Probable galactinol--sucrose galactosyltransferase 1; Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers (By similarity). (754 aa)
SHH2Protein SAWADEE HOMEODOMAIN HOMOLOG 2; May play a role in the recruitment of Pol IV to genomic regions associated with K9 methylated histone H3 that are targets for RdDM. (348 aa)
RFS6Probable galactinol--sucrose galactosyltransferase 6; Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers (By similarity). (749 aa)
RGTA1Geranylgeranyl transferase type-2 subunit alpha 1; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2. In vitro, can prenylate PGGTI targets with the C-terminal Cys-aliphatic-aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C-terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the alpha subunit is associated with a beta subunit (RGTB1 or RGTB2). (678 aa)
RFS2Probable galactinol--sucrose galactosyltransferase 2; Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers (By similarity); Belongs to the glycosyl hydrolases 36 family. (773 aa)
NDL2Protein NDL2; Involved in a signaling pathway that modulates root auxin transport and auxin gradients. Acts partially by positively regulating the auxin carrier PIN2 and AUX1. Acts, together with GB1 as positive regulator of meristem initiation and branching. GB1 and NDL2 positively regulate basipetal inflorescence auxin transport and modulate MAX2 expression in shoots, which regulates organ and lateral meristem formation by the establishment and maintenance of auxin gradients. (344 aa)
K24C1.7Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity). (166 aa)
RGTA2Geranylgeranyl transferase type-2 subunit alpha 2; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2 (By similarity). Does not seem to be a functional Rab-GGT alpha subunit in vitro. (687 aa)
NDL1Protein NDL1; Interacts with the heterotrimeric G protein beta subunit GB1 and plays an significant role in GB1-dependent regulation of lateral root formation. Involved in a signaling pathway that modulates root auxin transport and auxin gradients. Acts partially by positively regulating the auxin carrier PIN2 and AUX1. Acts, together with GB1 as positive regulator of meristem initiation and branching. GB1 and NDL1 positively regulate basipetal inflorescence auxin transport and modulate MAX2 expression in shoots, which regulates organ and lateral meristem formation by the establishment [...] (346 aa)
RFS5Probable galactinol--sucrose galactosyltransferase 5; Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers (By similarity); Belongs to the glycosyl hydrolases 36 family. (783 aa)
RGTB2Geranylgeranyl transferase type-2 subunit beta 2; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2. In vitro, can prenylate PGGTI targets with the C-terminal sequence Cys-aliphatic-aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C- terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the beta subunit is associated with the alpha subunit RGTA1. (317 aa)
Q9LK96_ARATHGroES-like zinc-binding alcohol dehydrogenase family protein. (366 aa)
T5P19_110GroES-like zinc-binding alcohol dehydrogenase family protein. (348 aa)
F13E7.29Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity). (166 aa)
T16L4.30Nucleophosmin. (306 aa)
CEQORHChloroplast envelope quinone oxidoreductase homolog; NADPH-dependent alpha,beta-unsaturated oxoene reductase reducing the double bond of medium-chain (C9) to long-chain (C18) reactive electrophile species deriving from poly-unsaturated fatty acid peroxides. The best substrates are 13-lipoxygenase-derived gamma- ketols, but is unable to reduce the double bond of short-chain alkenals and alkenones such as acrolein, crotonaldehyde, 3-buten-2-one, 4-hexen- 3-one and trans-2-hexenal, or quinones such as duroquinone, decylubiquinone, coenzyme Q0, menadione, menaquinone and phylloquinone. Can [...] (329 aa)
F8K7.10DPP6 N-terminal domain-like protein. (706 aa)
F8K7.9DPP6 amino-terminal domain protein. (703 aa)
AORNADPH-dependent alkenal/one oxidoreductase, chloroplastic; Reduces the double bond in short-chain unsaturated carbonyls. Acts preferentially on alpha,beta-unsaturated ketones rather on alpha,beta-unsaturated aldehydes. Has no activity with (E)-2-hexenal and (E)-2-pentenal. Contributes to detoxify stromal reactive carbonyls produced under oxidative stress. Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (386 aa)
NDL3Protein NDL3; Involved in a signaling pathway that modulates root auxin transport and auxin gradients. Acts partially by positively regulating the auxin carrier PIN2 and AUX1. Acts, together with GB1 as positive regulator of meristem initiation and branching. GB1 and NDL3 positively regulate basipetal inflorescence auxin transport and modulate MAX2 expression in shoots, which regulates organ and lateral meristem formation by the establishment and maintenance of auxin gradients. (347 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (22%) [HD]