STRINGSTRING
T3P18.15 T3P18.15 RPF2 RPF2 EMB3131 EMB3131 F28P10.40 F28P10.40 F6D8.14 F6D8.14 MZB10.9 MZB10.9 F7O18.25 F7O18.25 EMB2750 EMB2750 LPE1 LPE1 F2H17.15 F2H17.15 F2K11.22 F2K11.22 EMB2217 EMB2217 F25C20.14 F25C20.14 PTAC2 PTAC2 F4H5.20 F4H5.20 AP22.65 AP22.65 MSL1.5 MSL1.5 MQL5.22 MQL5.22 MWJ3.2 MWJ3.2 MJB24.6 MJB24.6 MMI9.20 MMI9.20 PPR40 PPR40 K21L13.7 K21L13.7 F10E10.5 F10E10.5 F21B7.18 F21B7.18 F16P17.5 F16P17.5 F16P17.6 F16P17.6 RPF3 RPF3 F13K23.2 F13K23.2 F18O14.1 F18O14.1 MJG19.11 MJG19.11 F7J8_90 F7J8_90 T9L3_70 T9L3_70 MHF15.8 MHF15.8 MXC9.6 MXC9.6 MSJ1.16 MSJ1.16 MTG13.9 MTG13.9 MEE6.24 MEE6.24 MKD10.5 MKD10.5 K24G6.6 K24G6.6 MMN10.14 MMN10.14 EMB2745 EMB2745 MQK4.15 MQK4.15 F16M19.17 F16M19.17 F16M19.5 F16M19.5 F16M19.13 F16M19.13 F1M20.26 F1M20.26 F25P22.13 F25P22.13 F9N12.5 F9N12.5 F5M6.15 F5M6.15 T12C24.15 T12C24.15 T5K18.220 T5K18.220 ATC401 ATC401 EMB2654 EMB2654 CRP1 CRP1 F9G14_140 F9G14_140 F27F23.8 F27F23.8 PRORP2 PRORP2 EMB1270 EMB1270 F17F16.24 F17F16.24 T27F4.19 T27F4.19 F20L16.2 F20L16.2 F6P23.26 F6P23.26 PPR4 PPR4 MRL1 MRL1 F5O11.4 F5O11.4 EMB2794 EMB2794 T6K21.90-2 T6K21.90-2 T4C15.20 T4C15.20 F12C20.17 F12C20.17 LOJ LOJ F19F24.14 F19F24.14 EMB1025 EMB1025 EMB976 EMB976 F21M12.7 F21M12.7 PRORP3 PRORP3 F9N12.6 F9N12.6 F12P21.10 F12P21.10 F12A24.6 F12A24.6 T8O11.9 T8O11.9 ABO5 ABO5 F9O13.18 F9O13.18
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T3P18.15Pentatricopeptide repeat-containing protein At1g62590; Belongs to the PPR family. P subfamily. (634 aa)
RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial. (630 aa)
EMB3131Pentatricopeptide repeat-containing protein At4g20740; Belongs to the PPR family. P subfamily. (727 aa)
F28P10.40Pentatricopeptide repeat-containing protein At3g54980, mitochondrial. (851 aa)
F6D8.14Pentatricopeptide repeat-containing protein At1g52640, mitochondrial. (523 aa)
MZB10.9Pentatricopeptide repeat-containing protein At3g09060; Belongs to the PPR family. P subfamily. (687 aa)
F7O18.25Pentatricopeptide repeat-containing protein At3g04760, chloroplastic. (602 aa)
EMB2750Pentatricopeptide repeat-containing protein At3g06430, chloroplastic. (486 aa)
LPE1Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic; Required for light-regulated photosystem II (PSII) biogenesis and grana thylakoids formation by binding to the 5' UTR of PSII subunit mRNAs (e.g. psbJ, psbN and psbA) in a light-dependent manner through a redox-based mechanism, and facilitating the association of HCF173 with target mRNAs, which encodes PSII reaction center proteins (e.g. J, N and D1), thus regulating its expression by modulating ribosome loading. Belongs to the PPR family. P subfamily. (665 aa)
F2H17.15Pentatricopeptide repeat-containing protein At2g36240; Belongs to the PPR family. P subfamily. (497 aa)
F2K11.22Pentatricopeptide repeat-containing protein At1g63400; Belongs to the PPR family. P subfamily. (577 aa)
EMB2217Pentatricopeptide repeat-containing protein At1g79490, mitochondrial. (836 aa)
F25C20.14Pentatricopeptide repeat-containing protein At1g11710, mitochondrial. (657 aa)
PTAC2Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Involved in plastid gene expression. Belongs to the PPR family. P subfamily. (862 aa)
F4H5.20Pentatricopeptide repeat-containing protein At1g06710, mitochondrial. (987 aa)
AP22.65Pentatricopeptide repeat-containing protein At4g36680, mitochondrial. (412 aa)
MSL1.5Pentatricopeptide repeat-containing protein At3g16010; Belongs to the PPR family. P subfamily. (642 aa)
MQL5.22Pentatricopeptide repeat-containing protein At5g47360; Belongs to the PPR family. P subfamily. (477 aa)
MWJ3.2Pentatricopeptide repeat-containing protein At5g55840; Belongs to the PPR family. P subfamily. (1096 aa)
MJB24.6Pentatricopeptide repeat-containing protein At5g57250, mitochondrial. (971 aa)
MMI9.20Pentatricopeptide repeat-containing protein At5g62370; Belongs to the PPR family. P subfamily. (982 aa)
PPR40Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial; Required for the ubiquinol-cytochrome c oxidoreductase activity of mitochondrial complex III; Belongs to the PPR family. P subfamily. (659 aa)
K21L13.7Pentatricopeptide repeat-containing protein At5g65560; Belongs to the PPR family. P subfamily. (915 aa)
F10E10.5Pentatricopeptide repeat-containing protein At5g46580, chloroplastic. (711 aa)
F21B7.18Pentatricopeptide repeat-containing protein At1g03560, mitochondrial. (660 aa)
F16P17.5Pentatricopeptide repeat-containing protein At1g62910; Belongs to the PPR family. P subfamily. (632 aa)
F16P17.6Pentatricopeptide repeat-containing protein At1g62914, mitochondrial. (528 aa)
RPF3Pentatricopeptide repeat-containing protein At1g62930, chloroplastic. (629 aa)
F13K23.2Pentatricopeptide repeat-containing protein At1g12775, mitochondrial. (644 aa)
F18O14.1Putative pentatricopeptide repeat-containing protein At1g19290; Belongs to the PPR family. P subfamily. (904 aa)
MJG19.11Pentatricopeptide repeat-containing protein At3g13160, mitochondrial. (394 aa)
F7J8_90Pentatricopeptide repeat-containing protein At5g01110; Belongs to the PPR family. P subfamily. (729 aa)
T9L3_70Pentatricopeptide repeat-containing protein At5g14770, mitochondrial. (940 aa)
MHF15.8Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial. (1030 aa)
MXC9.6Pentatricopeptide repeat-containing protein At5g12100, mitochondrial. (816 aa)
MSJ1.16Pentatricopeptide repeat-containing protein At5g64320, mitochondrial. (730 aa)
MTG13.9Pentatricopeptide repeat-containing protein At5g16640, mitochondrial. (504 aa)
MEE6.24Pentatricopeptide repeat-containing protein At5g41170, mitochondrial. (527 aa)
MKD10.5Pentatricopeptide repeat-containing protein At5g38730; Belongs to the PPR family. P subfamily. (596 aa)
K24G6.6Pentatricopeptide repeat-containing protein At5g48730, chloroplastic. (508 aa)
MMN10.14Putative pentatricopeptide repeat-containing protein At5g59900; Belongs to the PPR family. P subfamily. (907 aa)
EMB2745Pentatricopeptide repeat-containing protein At5g39710; Belongs to the PPR family. P subfamily. (747 aa)
MQK4.15Pentatricopeptide repeat-containing protein At5g16420, mitochondrial. (535 aa)
F16M19.17Pentatricopeptide repeat-containing protein At1g63080, mitochondrial. (614 aa)
F16M19.5Pentatricopeptide repeat-containing protein At1g63130, mitochondrial. (630 aa)
F16M19.13Pentatricopeptide repeat-containing protein At1g63150; Belongs to the PPR family. P subfamily. (629 aa)
F1M20.26Putative pentatricopeptide repeat-containing protein At1g74580; Belongs to the PPR family. P subfamily. (763 aa)
F25P22.13Pentatricopeptide repeat-containing protein At1g73710; Belongs to the PPR family. P subfamily. (991 aa)
F9N12.5Pentatricopeptide repeat-containing protein At1g63330; Belongs to the PPR family. P subfamily. (559 aa)
F5M6.15Putative pentatricopeptide repeat-containing protein At1g31840. (840 aa)
T12C24.15Pentatricopeptide repeat-containing protein At1g12620; Belongs to the PPR family. P subfamily. (621 aa)
T5K18.220Pentatricopeptide repeat-containing protein At4g19440, chloroplastic. (838 aa)
ATC401Pentatricopeptide repeat-containing protein At5g21222; In the C-terminal section; belongs to the PPR family. P subfamily. (831 aa)
EMB2654Pentatricopeptide repeat-containing protein At2g41720. (822 aa)
CRP1Pentatricopeptide repeat-containing protein At5g42310, chloroplastic; Required for chloroplast protein synthesis and accumulation of subunits of the thylakoid protein complexes. Activates psaC and petA translation by binding their 5'-UTRs. Required for the correct processing of petB and petD mRNAs. Interacts with the petB and petD intergenic region and is required for the generation of petB and petD monocistronic RNAs; Belongs to the PPR family. P subfamily. (709 aa)
F9G14_140Pentatricopeptide repeat-containing protein At5g02830, chloroplastic. (852 aa)
F27F23.8Pentatricopeptide repeat-containing protein At2g19280; Belongs to the PPR family. P subfamily. (693 aa)
PRORP2Proteinaceous RNase P 2; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) ; Belongs to the PPR family. P subfamily. (528 aa)
EMB1270Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; May play a role in embryogenesis. Belongs to the PPR family. P subfamily. (1440 aa)
F17F16.24Putative pentatricopeptide repeat-containing protein At1g16830; Belongs to the PPR family. P subfamily. (608 aa)
T27F4.19Pentatricopeptide repeat-containing protein At1g66345, mitochondrial. (544 aa)
F20L16.2Pentatricopeptide repeat-containing protein At5g18475; Belongs to the PPR family. P subfamily. (506 aa)
F6P23.26Pentatricopeptide repeat-containing protein At2g17140; Belongs to the PPR family. P subfamily. (874 aa)
PPR4Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; May play a role in the plastid ribosome biogenesis. Belongs to the PPR family. P subfamily. (952 aa)
MRL1Pentatricopeptide repeat-containing protein MRL1, chloroplastic; Regulator of the large subunit (LS) of RuBisCO. Involved either in the processing or in the stabilization of the processed transcript, probably by acting as a barrier to the 5'>3' degradation. Belongs to the PPR family. P subfamily. (1089 aa)
F5O11.4Pentatricopeptide repeat-containing protein At1g12300, mitochondrial. (637 aa)
EMB2794Putative pentatricopeptide repeat-containing protein At2g02150; Belongs to the PPR family. P subfamily. (761 aa)
T6K21.90-2Putative pentatricopeptide repeat-containing protein At4g17915; Belongs to the PPR family. P subfamily. (463 aa)
T4C15.20Pentatricopeptide repeat-containing protein At2g35130. (591 aa)
F12C20.17Pentatricopeptide repeat-containing protein At2g26790, mitochondrial. (799 aa)
LOJPentatricopeptide repeat-containing protein At2g39230, mitochondrial; Involved in lateral organ development and boundary demarcation. (867 aa)
F19F24.14Pentatricopeptide repeat-containing protein At2g18940, chloroplastic. (822 aa)
EMB1025Pentatricopeptide repeat-containing protein At4g20090; May play a role in embryogenesis. (660 aa)
EMB976Pentatricopeptide repeat-containing protein At5g27270; Belongs to the PPR family. P subfamily. (1038 aa)
F21M12.7Putative pentatricopeptide repeat-containing protein At1g09680; Belongs to the PPR family. P subfamily. (607 aa)
PRORP3Proteinaceous RNase P 3; Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA); Belongs to the PPR family. P subfamily. (576 aa)
F9N12.6Pentatricopeptide repeat (PPR) superfamily protein. (189 aa)
F12P21.10Tetratricopeptide repeat (TPR)-like superfamily protein. (811 aa)
F12A24.6Pentatricopeptide repeat-containing protein At2g16880; Belongs to the PPR family. P subfamily. (743 aa)
T8O11.9Pentatricopeptide repeat-containing protein At2g01740; Belongs to the PPR family. P subfamily. (559 aa)
ABO5Pentatricopeptide repeat-containing protein At1g51965, mitochondrial. (650 aa)
F9O13.18Pentatricopeptide repeat-containing protein At2g15630, mitochondrial. (627 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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