Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LRE | MYB98 | B3GS44 | Q9S7L2 | GPI-anchored protein LORELEI; Female gametophyte-specific component of the signaling pathway required for fertilization. Required for reception of the pollen tube by the female gametophyte. Acts specifically at the synergid cell surface for pollen tube reception. Plays a role in double fertilization and early seed development. Component of the FER-regulated Rho GTPase signaling complex. Acts as a chaperone and coreceptor for FER. Required for localization of FER to the plasma membrane. | Transcription factor MYB98; Transcription factor that binds to the motif 5'-GTAACNT-3' in the promoter of target genes (e.g. DD11 and DD18) and promotes their expression within synergid cells (e.g. in the filiform apparatus) in ovules. Required for the formation of the filiform apparatus during synergid cell differentiation in the female gametophyte. Involved in pollen tube guidance to the micropyle. | 0.436 |
| MYB98 | LRE | Q9S7L2 | B3GS44 | Transcription factor MYB98; Transcription factor that binds to the motif 5'-GTAACNT-3' in the promoter of target genes (e.g. DD11 and DD18) and promotes their expression within synergid cells (e.g. in the filiform apparatus) in ovules. Required for the formation of the filiform apparatus during synergid cell differentiation in the female gametophyte. Involved in pollen tube guidance to the micropyle. | GPI-anchored protein LORELEI; Female gametophyte-specific component of the signaling pathway required for fertilization. Required for reception of the pollen tube by the female gametophyte. Acts specifically at the synergid cell surface for pollen tube reception. Plays a role in double fertilization and early seed development. Component of the FER-regulated Rho GTPase signaling complex. Acts as a chaperone and coreceptor for FER. Required for localization of FER to the plasma membrane. | 0.436 |
| PV42A | PV42B | Q9XI37 | Q8GXI9 | SNF1-related protein kinase regulatory subunit gamma-like PV42a; Plays redundant role with PV42b in regulating male gametogenesis and pollen tube guidance. | SNF1-related protein kinase regulatory subunit gamma-like PV42b; Plays redundant role with PV42a in regulating male gametogenesis and pollen tube guidance. | 0.631 |
| PV42A | SNF4 | Q9XI37 | Q944A6 | SNF1-related protein kinase regulatory subunit gamma-like PV42a; Plays redundant role with PV42b in regulating male gametogenesis and pollen tube guidance. | Sucrose nonfermenting 4-like protein; Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. | 0.913 |
| PV42B | PV42A | Q8GXI9 | Q9XI37 | SNF1-related protein kinase regulatory subunit gamma-like PV42b; Plays redundant role with PV42a in regulating male gametogenesis and pollen tube guidance. | SNF1-related protein kinase regulatory subunit gamma-like PV42a; Plays redundant role with PV42b in regulating male gametogenesis and pollen tube guidance. | 0.631 |
| PV42B | SNF4 | Q8GXI9 | Q944A6 | SNF1-related protein kinase regulatory subunit gamma-like PV42b; Plays redundant role with PV42a in regulating male gametogenesis and pollen tube guidance. | Sucrose nonfermenting 4-like protein; Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. | 0.915 |
| SNF4 | PV42A | Q944A6 | Q9XI37 | Sucrose nonfermenting 4-like protein; Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. | SNF1-related protein kinase regulatory subunit gamma-like PV42a; Plays redundant role with PV42b in regulating male gametogenesis and pollen tube guidance. | 0.913 |
| SNF4 | PV42B | Q944A6 | Q8GXI9 | Sucrose nonfermenting 4-like protein; Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. | SNF1-related protein kinase regulatory subunit gamma-like PV42b; Plays redundant role with PV42a in regulating male gametogenesis and pollen tube guidance. | 0.915 |