23 items (Arabidopsis thaliana) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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experimentally determined

Predicted Interactions

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protein homology

Your Input:
	RLP54	Receptor-like protein 54. (792 aa)
	ERF008	Ethylene-responsive transcription factor ERF008; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily. (176 aa)
	WRKY25	Probable WRKY transcription factor 25; Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis- acting element (By similarity). Functions with WRKY33 as positive regulator of salt stress response and abscisic acid (ABA) signaling. Plays a partial role in heat stress tolerance. Functions with WRKY26 and WRKY33 as positive regulator of plant thermotolerance by partially participating in ethylene-response signal transduction pathway. (393 aa)
	PDF1.2B	Putative defensin-like protein 15; Confers broad-spectrum resistance to pathogens; Belongs to the DEFL family. (80 aa)
	PDF1.3	Defensin-like protein 14; Confers broad-spectrum resistance to pathogens. Has antifungal activity in vitro; Belongs to the DEFL family. (80 aa)
	AAC1	ADP,ATP carrier protein 1, mitochondrial; Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane; Belongs to the mitochondrial carrier (TC 2.A.29) family. (381 aa)
	RAP2-3	Ethylene-responsive transcription factor RAP2-3; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily. (248 aa)
	MYB6	Transcription repressor MYB6. (236 aa)
	DOF3.4	Dof zinc finger protein DOF3.4; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements. (253 aa)
	MYB52	Transcription factor MYB52; Transcription factor that confers sensitivity to abscisic acid (ABA) and salt, but tolerance to drought. Regulates secondary cell wall (SCW) biosynthesis, especially in interfascicular and xylary fibers. (249 aa)
	MYB3R3	Transcription factor MYB3R-3; Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (By similarity). Transcription repressor that regulates organ growth. Binds to the promoters of G2/M-specific genes and to E2F target genes to prevent their expression in post-mitotic cells and to restrict the time window of their expression in proliferating cells. (505 aa)
	RVE8	Protein REVEILLE 8; Transcriptional activator of evening element (EE)-containing clock-controlled genes. Forms a negative feedback loop with APRR5. Regulates the pattern of histone H3 acetylation of the TOC1 promoter. (298 aa)
	MYB78	Transcription factor MYB78. (307 aa)
	F1I16_140	MYB transcription factor-like protein. (399 aa)
	F7J8.180	Duplicated homeodomain-like superfamily protein. (267 aa)
	K17E12.4	Kelch repeat-containing protein At3g27220. (426 aa)
	WRKY65	Probable WRKY transcription factor 65; Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis- acting element (By similarity). (259 aa)
	KUA1	Transcription factor KUA1; Transcriptional repressor. Direct regulator of the transcription of peroxidase (Prxs) and reactive oxygen species (ROS)-related genes via the recognition of 5'-ATCACA-3' motif. Binds to 5'-TATCCA-3' motif (TA box) and represses the activity of corresponding promoters (e.g. sugar response genes). Regulates hypocotyl elongation in response to darkness by enhancing auxin accumulation in a phytochrome-interacting factor (PIF) proteins-dependent manner. Promotes lateral roots formation. Promotes cell expansion during leaves development via the modulation of cell w [...] (365 aa)
	DREB1A	Dehydration-responsive element-binding protein 1A; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation; Belongs to the AP2/ERF transcription factor family. ERF subfamily. (216 aa)
	TRB3	Telomere repeat-binding factor 3; Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. Belongs to the histone H1/H5 family. SMH subfamily. (295 aa)
	F9E10.31	Putative MYB family transcription factor; 86049-87165. (265 aa)
	MYR2	Myb-related protein 2; Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation. Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity. Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA. Belongs to the MYB-CC family. (394 aa)
	ATMYB69	Putative transcription factor. (250 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAC1	RLP54	P31167	F4KHA2	ADP,ATP carrier protein 1, mitochondrial; Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Receptor-like protein 54.	0.700
AAC1	TRB3	P31167	Q9M2X3	ADP,ATP carrier protein 1, mitochondrial; Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Telomere repeat-binding factor 3; Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. Belongs to the histone H1/H5 family. SMH subfamily.	0.401
DOF3.4	F7J8.180	Q39088	Q9LFB6	Dof zinc finger protein DOF3.4; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements.	Duplicated homeodomain-like superfamily protein.	0.416
DOF3.4	K17E12.4	Q39088	Q9LK31	Dof zinc finger protein DOF3.4; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements.	Kelch repeat-containing protein At3g27220.	0.431
DOF3.4	RLP54	Q39088	F4KHA2	Dof zinc finger protein DOF3.4; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements.	Receptor-like protein 54.	0.408
DOF3.4	TRB3	Q39088	Q9M2X3	Dof zinc finger protein DOF3.4; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements.	Telomere repeat-binding factor 3; Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. Belongs to the histone H1/H5 family. SMH subfamily.	0.400
ERF008	F7J8.180	O22174	Q9LFB6	Ethylene-responsive transcription factor ERF008; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily.	Duplicated homeodomain-like superfamily protein.	0.542
ERF008	F9E10.31	O22174	Q9S7N6	Ethylene-responsive transcription factor ERF008; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily.	Putative MYB family transcription factor; 86049-87165.	0.527
ERF008	K17E12.4	O22174	Q9LK31	Ethylene-responsive transcription factor ERF008; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily.	Kelch repeat-containing protein At3g27220.	0.542
ERF008	MYR2	O22174	Q9SQQ9	Ethylene-responsive transcription factor ERF008; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily.	Myb-related protein 2; Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation. Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity. Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA. Belongs to the MYB-CC family.	0.418
ERF008	RLP54	O22174	F4KHA2	Ethylene-responsive transcription factor ERF008; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily.	Receptor-like protein 54.	0.541
ERF008	TRB3	O22174	Q9M2X3	Ethylene-responsive transcription factor ERF008; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily.	Telomere repeat-binding factor 3; Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. Belongs to the histone H1/H5 family. SMH subfamily.	0.540
F1I16_140	F7J8.180	Q9LDW5	Q9LFB6	MYB transcription factor-like protein.	Duplicated homeodomain-like superfamily protein.	0.587
F1I16_140	F9E10.31	Q9LDW5	Q9S7N6	MYB transcription factor-like protein.	Putative MYB family transcription factor; 86049-87165.	0.545
F1I16_140	K17E12.4	Q9LDW5	Q9LK31	MYB transcription factor-like protein.	Kelch repeat-containing protein At3g27220.	0.597
F1I16_140	MYR2	Q9LDW5	Q9SQQ9	MYB transcription factor-like protein.	Myb-related protein 2; Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation. Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity. Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA. Belongs to the MYB-CC family.	0.485
F1I16_140	RLP54	Q9LDW5	F4KHA2	MYB transcription factor-like protein.	Receptor-like protein 54.	0.546
F1I16_140	TRB3	Q9LDW5	Q9M2X3	MYB transcription factor-like protein.	Telomere repeat-binding factor 3; Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. Belongs to the histone H1/H5 family. SMH subfamily.	0.547
F7J8.180	DOF3.4	Q9LFB6	Q39088	Duplicated homeodomain-like superfamily protein.	Dof zinc finger protein DOF3.4; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements.	0.416
F7J8.180	ERF008	Q9LFB6	O22174	Duplicated homeodomain-like superfamily protein.	Ethylene-responsive transcription factor ERF008; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily.	0.542