STRINGSTRING
atp6 atp6 nad5 nad5 nad4 nad4 ccmFN2 ccmFN2 RPF1 RPF1 ND5 ND5 ND4 ND4 F5O11.4 F5O11.4 PPR4 PPR4 CCMFN2 CCMFN2 COIL COIL RH47 RH47 T12C24.15 T12C24.15 LWD1 LWD1 F13K23.2 F13K23.2 CYP19-2 CYP19-2 EMB2750 EMB2750
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atp6ATP synthase subunit a. (385 aa)
nad5NADH-ubiquinone oxidoreductase chain 5; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (669 aa)
nad4NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (495 aa)
ccmFN2Cytochrome c biogenesis FN2. (203 aa)
RPF1Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial. (602 aa)
ND5NADH-ubiquinone oxidoreductase chain 5; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). (669 aa)
ND4NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). (495 aa)
F5O11.4Pentatricopeptide repeat-containing protein At1g12300, mitochondrial. (637 aa)
PPR4Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; May play a role in the plastid ribosome biogenesis. Belongs to the PPR family. P subfamily. (952 aa)
CCMFN2Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2; Forms a complex with CCMFC, CCMFN1 and CCMH that performs the assembly of heme with c-type apocytochromes in mitochondria. Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family. (203 aa)
COILCoilin; Probable component of nuclear coiled bodies, also known as Cajal bodies or CBs, which are involved in the modification and assembly of nucleoplasmic snRNPs (Probable). Required for CBs formation. Binds snRNAs and non-specific artificial RNA via the N-terminal part of the NOD domain and via the NLS2 region (212-282) of the IDD domain. The two sites are able to function independently and provide effective RNA-binding in a non-cooperative manner. (608 aa)
RH47DEAD-box ATP-dependent RNA helicase 47, mitochondrial; Essential protein required during embryogenesis. Required for mitochondrial metabolism. Necessary for normal plasmodesmata (PD) development and aperture regulation. Belongs to the DEAD box helicase family. (551 aa)
T12C24.15Pentatricopeptide repeat-containing protein At1g12620; Belongs to the PPR family. P subfamily. (621 aa)
LWD1WD repeat-containing protein LWD1; Clock protein essential for the proper expression phase and period length of both the oscillator and output genes known to participate in photoperiod sensing. Required for the expression of APRR9, APRR7, and APRR5. Regulated by APRR9 and APRR7 at the transcriptional level, indicating the existence of a positive feedback loop within the circadian clock. May function to delay the expression of the morning genes until dawn approaches. (346 aa)
F13K23.2Pentatricopeptide repeat-containing protein At1g12775, mitochondrial. (644 aa)
CYP19-2Peptidyl-prolyl cis-trans isomerase CYP19-2; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (174 aa)
EMB2750Pentatricopeptide repeat-containing protein At3g06430, chloroplastic. (486 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]