STRINGSTRING
NIA2 NIA2 CERK1 CERK1 ZIP1 ZIP1 PIP PIP RLK1 RLK1 CLPB4 CLPB4 CDC73 CDC73 HERK1 HERK1 F2A19.140 F2A19.140 F-ATMBP F-ATMBP
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
NIA2Nitrate reductase [NADH] 2; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (917 aa)
CERK1Chitin elicitor receptor kinase 1; Lysin motif (LysM) receptor kinase that functions as a cell surface receptor in chitin elicitor (chitooligosaccharides) signaling leading to innate immunity toward both biotic and abiotic stresses (e.g. tolerance to salinity, heavy-metal stresses, and Botrytis cinerea infection). Recognizes microbe-derived N-acetylglucosamine (NAG)- containing ligands. Involved in the resistance to pathogenic fungi Alternaria brassicicola and Erysiphe cichoracearum, probably by sensing microbe-associated molecular patterns (MAMP) and pathogen-associated molecular patt [...] (617 aa)
ZIP1Zinc transporter 1; Mediates zinc uptake from the rhizosphere. May also transport copper and cadmium ions. (355 aa)
PIPProline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides; Belongs to the peptidase S33 family. (380 aa)
RLK1G-type lectin S-receptor-like serine/threonine-protein kinase RLK1. (832 aa)
CLPB4Chaperone protein ClpB4, mitochondrial; Molecular chaperone that does not seem to be involved in heat stress response or tolerance; Belongs to the ClpA/ClpB family. (964 aa)
CDC73Protein CDC73 homolog; Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 'Lys-4' (H3K4me3). Involved in regulation of flowering time. Required for the expression of the flowering repressors FLC and MADS- box genes of the MAF family. Required for histone H3 trimethylation on 'Lys-4' (H3K4me3) at the FLC locus. Prevents trimethylation on 'Lys-27' (H3K27me3) at the same locus. (415 aa)
HERK1Receptor-like protein kinase HERK 1; Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner. (830 aa)
F2A19.140Alpha/beta-Hydrolases superfamily protein. (515 aa)
F-ATMBPMyrosinase-binding protein 2; Belongs to the jacalin lectin family. (642 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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