STRINGSTRING
CLE42 CLE42 CLE13 CLE13 WOX4 WOX4 CLE41 CLE41 RLK RLK TDR TDR PXL1 PXL1 WOX14 WOX14 ERF098 ERF098 MIK1 MIK1 CLV3 CLV3 SERK2 SERK2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CLE42CLAVATA3/ESR (CLE)-related protein 42; Extracellular signal peptide that regulates cell fate. Represses tracheary element differentiation but promotes the formation of procambial cells; Belongs to the CLV3/ESR signal peptide family. (88 aa)
CLE13CLAVATA3/ESR (CLE)-related protein 13; Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Belongs to the CLV3/ESR signal peptide family. (107 aa)
WOX4WUSCHEL-related homeobox 4; Transcription factor which may be involved in developmental processes. (251 aa)
CLE41CLAVATA3/ESR (CLE)-related protein 41; Extracellular signal peptide that regulates cell fate. May act with TDR as a ligand-receptor pair in a signal transduction pathway that represses tracheary element differentiation but promotes the formation of procambial cells adjacent to phloem cells in the veins in an auxin-dependent manner. (99 aa)
RLKLeucine-rich repeat receptor-like protein kinase. (751 aa)
TDRLeucine-rich repeat receptor-like protein kinase TDR; Acts with CLE41p and CLE44p peptides as a ligand-receptor pair in a signal transduction pathway involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Mediates repression of tracheary element differentiation and the promotion of procambial cells formation and polar division adjacent to phloem cells in the veins; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1041 aa)
PXL1Leucine-rich repeat receptor-like protein kinase PXL1; Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Phosphorylates HIRD11 and LHCA1 in vitro. (1029 aa)
WOX14WUSCHEL-related homeobox 14; Transcription factor which may be involved in developmental processes. (211 aa)
ERF098Ethylene-responsive transcription factor ERF098; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). (139 aa)
MIK1MDIS1-interacting receptor like kinase 1; Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Involved in the pollen tube perception of the female signal. Phosphorylates MDSI1. (1013 aa)
CLV3Protein CLAVATA 3; Extracellular signal that regulates meristem maintenance. Acts with CLV1 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation; Belongs to the CLV3/ESR signal peptide family. (96 aa)
SERK2Somatic embryogenesis receptor kinase 2; Serine/threonine-kinase involved in brassinosteroid-dependent and -independent signaling pathways. Acts redundantly with SERK1 as a control point for sporophytic development controlling male gametophyte production. (628 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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