8 items (Arabidopsis thaliana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FD3	Ferredoxin-3, chloroplastic; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions; Belongs to the 2Fe2S plant-type ferredoxin family. (155 aa)
	TIM	Triosephosphate isomerase, chloroplastic; Belongs to the triosephosphate isomerase family. (315 aa)
	ORG3	Transcription factor ORG3. (258 aa)
	HSP23.6	23.6 kDa heat shock protein, mitochondrial; Belongs to the small heat shock protein (HSP20) family. (210 aa)
	APX3	L-ascorbate peroxidase 3; Plays a key role in hydrogen peroxide removal. (287 aa)
	CTIMC	Triosephosphate isomerase, cytosolic; Belongs to the triosephosphate isomerase family. (254 aa)
	EMB2360	Glutathione reductase, chloroplastic; Maintains high levels of reduced glutathione in the chloroplast. (565 aa)
	ORG2	Transcription factor ORG2. (253 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APX3	CTIMC	Q42564	P48491	L-ascorbate peroxidase 3; Plays a key role in hydrogen peroxide removal.	Triosephosphate isomerase, cytosolic; Belongs to the triosephosphate isomerase family.	0.499
APX3	EMB2360	Q42564	P42770	L-ascorbate peroxidase 3; Plays a key role in hydrogen peroxide removal.	Glutathione reductase, chloroplastic; Maintains high levels of reduced glutathione in the chloroplast.	0.951
APX3	TIM	Q42564	Q9SKP6	L-ascorbate peroxidase 3; Plays a key role in hydrogen peroxide removal.	Triosephosphate isomerase, chloroplastic; Belongs to the triosephosphate isomerase family.	0.523
CTIMC	APX3	P48491	Q42564	Triosephosphate isomerase, cytosolic; Belongs to the triosephosphate isomerase family.	L-ascorbate peroxidase 3; Plays a key role in hydrogen peroxide removal.	0.499
CTIMC	EMB2360	P48491	P42770	Triosephosphate isomerase, cytosolic; Belongs to the triosephosphate isomerase family.	Glutathione reductase, chloroplastic; Maintains high levels of reduced glutathione in the chloroplast.	0.573
CTIMC	TIM	P48491	Q9SKP6	Triosephosphate isomerase, cytosolic; Belongs to the triosephosphate isomerase family.	Triosephosphate isomerase, chloroplastic; Belongs to the triosephosphate isomerase family.	0.953
EMB2360	APX3	P42770	Q42564	Glutathione reductase, chloroplastic; Maintains high levels of reduced glutathione in the chloroplast.	L-ascorbate peroxidase 3; Plays a key role in hydrogen peroxide removal.	0.951
EMB2360	CTIMC	P42770	P48491	Glutathione reductase, chloroplastic; Maintains high levels of reduced glutathione in the chloroplast.	Triosephosphate isomerase, cytosolic; Belongs to the triosephosphate isomerase family.	0.573
EMB2360	TIM	P42770	Q9SKP6	Glutathione reductase, chloroplastic; Maintains high levels of reduced glutathione in the chloroplast.	Triosephosphate isomerase, chloroplastic; Belongs to the triosephosphate isomerase family.	0.598
ORG2	ORG3	Q9M1K1	Q9M1K0	Transcription factor ORG2.	Transcription factor ORG3.	0.840
ORG3	ORG2	Q9M1K0	Q9M1K1	Transcription factor ORG3.	Transcription factor ORG2.	0.840
TIM	APX3	Q9SKP6	Q42564	Triosephosphate isomerase, chloroplastic; Belongs to the triosephosphate isomerase family.	L-ascorbate peroxidase 3; Plays a key role in hydrogen peroxide removal.	0.523
TIM	CTIMC	Q9SKP6	P48491	Triosephosphate isomerase, chloroplastic; Belongs to the triosephosphate isomerase family.	Triosephosphate isomerase, cytosolic; Belongs to the triosephosphate isomerase family.	0.953
TIM	EMB2360	Q9SKP6	P42770	Triosephosphate isomerase, chloroplastic; Belongs to the triosephosphate isomerase family.	Glutathione reductase, chloroplastic; Maintains high levels of reduced glutathione in the chloroplast.	0.598