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MYB34 MYB34 ERF5 ERF5 HAT22 HAT22 ATHB-6 ATHB-6 TGA4 TGA4 TGA1 TGA1 ZFP4 ZFP4 NLP7 NLP7 VRN1 VRN1 HHO2 HHO2 HYH HYH BHLH112 BHLH112 WRKY18 WRKY18 F11B9.1 F11B9.1 BHLH96 BHLH96 BZIP8 BZIP8 LBD37 LBD37 HHO3 HHO3 AtbZIP3 AtbZIP3 GATA17 GATA17 TCP23 TCP23 HSFB2A HSFB2A LBD38 LBD38 CRF4 CRF4 RAV1 RAV1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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MYB34Transcription factor MYB34; Transcription factor involved in tryptophan gene activation and in indole-3-acetic acid (IAA) and indolic glucosinolates (IG) biosynthesis. Acts as a direct transcriptional activator of both Trp synthesis genes and Trp secondary metabolism genes. (295 aa)
ERF5Ethylene-responsive transcription factor 5; Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways; Belongs to the AP2/ERF transcription factor family. ERF subfamily. (300 aa)
HAT22Homeobox-leucine zipper protein HAT22; Probable transcription factor. (278 aa)
ATHB-6Homeobox-leucine zipper protein ATHB-6; Transcription activator that may act as growth regulators in response to water deficit. Interacts with the core sequence 5'- CAATTATTA-3' of promoters in response to ABA and in an ABI1-dependent manner. Involved in the negative regulation of the ABA signaling pathway; Belongs to the HD-ZIP homeobox family. Class I subfamily. (311 aa)
TGA4Transcription factor TGA4; Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'- TGACGTGG-3') another cis-acting element found in plant histone promoters. (364 aa)
TGA1Transcription factor TGA1; Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'- TGACGTGG-3') another cis-acting element found in plant histone promoters; Belongs to the bZIP family. (368 aa)
ZFP4Zinc finger protein 4; Acts as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development. (260 aa)
NLP7Protein NLP7; Transcription factor involved in regulation of nitrate assimilation and in transduction of the nitrate signal. (959 aa)
VRN1B3 domain-containing transcription factor VRN1; Involved in the regulation of vernalization. Acts as transcriptional repressor of FLC, a major target of the vernalization pathway. Binds DNA in vitro in a non-sequence-specific manner. (341 aa)
HHO2Transcription factor HHO2; Probable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. (354 aa)
HYHTranscription factor HY5-like; Transcription factor that promotes photomorphogenesis in light. Acts downstream of the light receptor network and directly affects transcription of light-induced genes. Specifically involved in the blue light specific pathway, suggesting that it participates in transmission of cryptochromes (CRY1 and CRY2) signals to downstream responses. In darkness, its degradation prevents the activation of light-induced genes; Belongs to the bZIP family. (149 aa)
BHLH112Transcription factor bHLH112. (393 aa)
WRKY18WRKY transcription factor 18; Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis- acting element. Positively modulates defense-related gene expression and disease resistance; Belongs to the WRKY group II-a family. (310 aa)
F11B9.1Duplicated homeodomain-like superfamily protein. (263 aa)
BHLH96Transcription factor bHLH96. (320 aa)
BZIP8Basic leucine zipper 8; Belongs to the bZIP family. (138 aa)
LBD37LOB domain-containing protein 37. (250 aa)
HHO3Transcription factor HHO3; Probable transcription factor involved in phosphate signaling in roots. (344 aa)
AtbZIP3Putative bZIP transcription factor AtbZip3. (186 aa)
GATA17GATA transcription factor 17; Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters; Belongs to the type IV zinc-finger family. Class B subfamily. (190 aa)
TCP23Transcription factor TCP23. (341 aa)
HSFB2AHeat stress transcription factor B-2a; Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). (299 aa)
LBD38LOB domain-containing protein 38; Belongs to the LOB domain-containing protein family. (247 aa)
CRF4Ethylene-responsive transcription factor CRF4; Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). (335 aa)
RAV1AP2/ERF and B3 domain-containing transcription factor RAV1; Binds specifically to bipartite recognition sequences composed of two unrelated motifs, 5'-CAACA-3' and 5'-CACCTG-3'. May function as negative regulator of plant growth and development. Belongs to the AP2/ERF transcription factor family. RAV subfamily. (344 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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