STRINGSTRING
F10N7.210 F10N7.210 TZF6 TZF6 JGB JGB CRB CRB GAPC1 GAPC1 rps7 rps7 OLEO1 OLEO1 rps7-A rps7-A RPS7 RPS7 OLEO2 OLEO2 TCP4 TCP4 HUA1 HUA1 F13M7.1 F13M7.1 CRC-2 CRC-2 RACK1B RACK1B T22E19.17 T22E19.17 F4N21.6 F4N21.6 ZFWD4 ZFWD4 ZFWD3 ZFWD3 ZFWD2 ZFWD2 ZFWD1 ZFWD1 BGAL2 BGAL2 F23A5.4 F23A5.4 GAL1 GAL1 T1B9.26 T1B9.26 F5O4.7 F5O4.7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F10N7.210PPPDE thiol peptidase family protein. (680 aa)
TZF6Zinc finger CCCH domain-containing protein 54; Embryo-specific transcription factor required at the globular to heart stage transition in embryo development. (245 aa)
JGBProtein JINGUBANG; Negative regulator of pollen germination. Prevents pollination in moist environments by inhibiting jasmonic acid synthesis. Stabilizes pollen tube growth. (465 aa)
CRB12S seed storage protein CRB alpha chain; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (455 aa)
GAPC1Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic; Key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3- phospho-D-glyceroyl phosphate. Essential for the maintenance of cellular ATP levels and carbohydrate metabolism. Required for full fertility. Involved in response to oxidative stress by mediating plant responses to abscisic acid (ABA) and water deficits through the activation of PLDDELTA and production of phosphatidic acid (PA), a multifunctional stress signaling lipid in plants. Associates with FBA6 to [...] (338 aa)
rps7Ribosomal protein S7. (148 aa)
OLEO1Oleosin 18.5 kDa; May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth; Belongs to the oleosin family. (173 aa)
rps7-A30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. (155 aa)
RPS7Ribosomal protein S7, mitochondrial; One of the primary rRNA binding proteins, it binds directly to 18S rRNA where it nucleates assembly of the head domain of the small subunit; Belongs to the universal ribosomal protein uS7 family. (148 aa)
OLEO2Oleosin 21.2 kDa; May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth (By similarity). (199 aa)
TCP4Transcription factor TCP4; Transcription factor playing a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Required during early steps of embryogenesis. Participates in ovule develpment. Activates LOX2 expression by binding to the 5'-GGACCA-3' motif found in its promoter. (420 aa)
HUA1Zinc finger CCCH domain-containing protein 37; Involved in flower development. Functions in floral reproductive organ identity by binding AGAMOUS (AG) pre-mRNA and promoting its processing. Functions in association with HUA2 and HEN4. (524 aa)
F13M7.1Zinc finger CCCH domain-containing protein 3; Possesses RNA-binding and ribonuclease activities in vitro. (404 aa)
CRC-212S seed storage protein CRC alpha chain; Seed storage protein. (524 aa)
RACK1BReceptor for activated C kinase 1B; Minor component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways. Involved in multiple hormone responses and developmental processes. MAPK cascade scaffolding protein involved in the protease IV and ArgC signaling pathway but not the flg22 pathway. Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily. (326 aa)
T22E19.17Zinc finger CCCH domain-containing protein 15. (308 aa)
F4N21.6Zinc finger CCCH domain-containing protein 14. (310 aa)
ZFWD4Zinc finger CCCH domain-containing protein 62. (419 aa)
ZFWD3Zinc finger CCCH domain-containing protein 59. (472 aa)
ZFWD2Zinc finger CCCH domain-containing protein 63. (443 aa)
ZFWD1Zinc finger CCCH domain-containing protein 48. (430 aa)
BGAL2Beta-galactosidase 2; Belongs to the glycosyl hydrolase 35 family. (727 aa)
F23A5.4PPPDE putative thiol peptidase family protein. (231 aa)
GAL1Galactokinase; Sugar-1-kinase with a very high substrate specificity for the alpha-anomeric configuration of D-galacose (D-Gal). Converts also efficiently 2-deoxy-D-Gal to 2-deoxy-D-al-1-phosphate. Belongs to the GHMP kinase family. GalK subfamily. (496 aa)
T1B9.26PPPDE putative thiol peptidase family protein. (265 aa)
F5O4.7Zinc finger CCCH domain-containing protein 17. (669 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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